RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 ZNRD1Q9P1U0 126 aa7.11□□□□□ -1.27
CCR9-203ENST00000395963 ZNF257Q9Y2Q1 563 aa7.11□□□□□ -1.27
CCR9-203ENST00000395963 LRBAP50851 2863 aa7.11□□□□□ -1.27
CCR9-203ENST00000395963 NAV2Q8IVL1 2488 aa7.11□□□□□ -1.27
CCR9-203ENST00000395963 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 TIMM23O14925 209 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 EREGO14944 169 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 SEC11BP0C7V7 166 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 CD99P14209 185 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 RPS10P46783 165 aaKnown RBP7.1□□□□□ -1.27
CCR9-203ENST00000395963 ATP5IP56385 69 aaPredicted RBP7.1□□□□□ -1.27
CCR9-203ENST00000395963 NDUFA6P56556 154 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 RPL15P61313 204 aaKnown RBP7.1□□□□□ -1.27
CCR9-203ENST00000395963 UTF1Q5T230 341 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 MOB3BQ86TA1 216 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 PIP4P2Q8N4L2 257 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 SLC35G3Q8N808 338 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 TMEM167AQ8TBQ9 72 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 HARBI1Q96MB7 349 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 PRNDQ9UKY0 176 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
CCR9-203ENST00000395963 GUK1Q16774 197 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 GFI1BQ5VTD9 330 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 C1orf229Q6ZS94 237 aaPredicted RBP7.1□□□□□ -1.27
CCR9-203ENST00000395963 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 TMEM242Q9NWH2 141 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 KIAA1456Q9P272 454 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 ZNF580Q9UK33 172 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 PDZD2O15018 2839 aa7.1□□□□□ -1.27
CCR9-203ENST00000395963 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 SOX15O60248 233 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 S1PR2O95136 353 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 IGHV3-7P01780 117 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 IGHV4-38-2P0DP08 117 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 KHDC3LQ587J8 217 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 PDZD11Q5EBL8 140 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.27
CCR9-203ENST00000395963 GGNBP1Q5YKI7 109 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 Q6ZRG5 221 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 MMD2Q8IY49 270 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 CIARTQ8N365 385 aaPredicted RBP7.09□□□□□ -1.27
CCR9-203ENST00000395963 OR5B3Q8NH48 314 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 PACRGQ96M98 296 aaPredicted RBP7.09□□□□□ -1.27
CCR9-203ENST00000395963 ARV1Q9H2C2 271 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
CCR9-203ENST00000395963 FOXA2Q9Y261 457 aaPredicted RBP7.09□□□□□ -1.27
CCR9-203ENST00000395963 PITX3O75364 302 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 AVPP01185 164 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 IGKV1-39P01597 117 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 IGKV1D-39P04432 117 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 SP6Q3SY56 376 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 LDLRAD2Q5SZI1 272 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 LHFPL4Q7Z7J7 247 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
CCR9-203ENST00000395963 C5orf51A6NDU8 294 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 PPP5D1E7EU14 171 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 NBR2O15453 112 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BKO60814 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 RAMP3O60896 148 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 KBTBD11O94819 623 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BJP06899 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 CRYGBP07316 175 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BOP23527 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BBP33778 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BDP58876 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 RPS16P62249 146 aaKnown RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BCP62807 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST2H2BEQ16778 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 FAM120AOSQ5T036 256 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 DTD1Q8TEA8 209 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BHQ93079 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 BSCL2Q96G97 398 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 CIB3Q96Q77 187 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BNQ99877 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 HIST1H2BMQ99879 126 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 TMEM140Q9NV12 185 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 TCF19Q9Y242 345 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 CELSR2Q9HCU4 2923 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCR9-203ENST00000395963 BORCS7-ASMTA0A0B4J1R7 106 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 A0A0U1RQK1 487 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 C15orf61A6NNL5 157 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 CLDN34H7C241 214 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 UPK2O00526 184 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 IGKV1-5P01602 117 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 TMEM11P17152 192 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 TAS2R30P59541 319 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 IL15RAQ13261 267 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 IAH1Q2TAA2 248 aaPredicted RBP7.08□□□□□ -1.28
CCR9-203ENST00000395963 Q6YL49 198 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 LYZL2Q7Z4W2 148 aa7.08□□□□□ -1.28
CCR9-203ENST00000395963 TMEM183AQ8IXX5 376 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms