RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.5
SREBF1-205ENST00000395757 KCNIP4Q6PIL6 250 aa11.9□□□□□ -0.5
SREBF1-205ENST00000395757 UHRF2Q96PU4 802 aa11.9□□□□□ -0.5
SREBF1-205ENST00000395757 hADV38S2A0JD32 116 aa11.9□□□□□ -0.51
SREBF1-205ENST00000395757 HRASP01112 189 aa11.9□□□□□ -0.51
SREBF1-205ENST00000395757 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.51
SREBF1-205ENST00000395757 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.51
SREBF1-205ENST00000395757 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 IFNL4K9M1U5 179 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 SOD3P08294 240 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 AGAP20933 346 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 ATP6V1FQ16864 119 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 LYPD6BQ8NI32 183 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-205ENST00000395757 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
SREBF1-205ENST00000395757 TEPPQ6URK8 271 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 MRPL20Q9BYC9 149 aaKnown RBP11.89□□□□□ -0.51
SREBF1-205ENST00000395757 TRAPPC1Q9Y5R8 145 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 PROP1O75360 226 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 MT-CO2P00403 227 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 DIAPH2-AS1Q14236 149 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 PRSS8Q16651 343 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 OR9G1Q8NH87 305 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
SREBF1-205ENST00000395757 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-205ENST00000395757 RPLP1P05386 114 aaKnown RBP11.88□□□□□ -0.51
SREBF1-205ENST00000395757 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 JPT1Q9UK76 154 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 C20orf202A1L168 122 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 KBTBD11O94819 623 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 MRPL54Q6P161 138 aaKnown RBP11.88□□□□□ -0.51
SREBF1-205ENST00000395757 DOLPP1Q86YN1 238 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 C1QL4Q86Z23 238 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 SAMD10Q9BYL1 202 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 CENPEQ02224 2701 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 CNIH1O95406 144 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 CRYBB3P26998 211 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 LYPD2Q6UXB3 125 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 TREML4Q6UXN2 200 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 BAGE2Q86Y30 109 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 SCNM1Q9BWG6 230 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
SREBF1-205ENST00000395757 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 SMG1Q96Q15 3661 aaKnown RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 RAB7AP51149 207 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 PNRC1Q12796 327 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 TNXAQ16473 311 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 SRSF7Q16629 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 WDR73Q6P4I2 378 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 NPVFQ9HCQ7 196 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 PPIAL4AQ9Y536 164 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 MOSP00540 346 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 RBX1P62877 108 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 TFPI2P48307 235 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 C1orf229Q6ZS94 237 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 AGMATQ9BSE5 352 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 TPPP3Q9BW30 176 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-205ENST00000395757 IDI2-AS1Q9NZ38 188 aa11.87□□□□□ -0.51
SREBF1-205ENST00000395757 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 A0A0G2JNJ9 132 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 LINC00614P0C842 121 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 LGALS4P56470 323 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
SREBF1-205ENST00000395757 SSBP3Q9BWW4 388 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-205ENST00000395757 Q9UFV3 132 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-205ENST00000395757 LRBAP50851 2863 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 TRAV5A0A0B4J249 113 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 NTF3P20783 257 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 CBLN1P23435 193 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 IER3P46695 156 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 RHOBP62745 196 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 Q8TCH9 128 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 HILPDAQ9Y5L2 63 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
SREBF1-205ENST00000395757 SETD2Q9BYW2 2564 aaPredicted RBP11.86□□□□□ -0.51
SREBF1-205ENST00000395757 DPRXA6NFQ7 191 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms