RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 CYB5BO43169 146 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 CD81P60033 236 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 IGHV3-7P01780 117 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 CTRB1P17538 263 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 PNRC1Q12796 327 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 CTRB2Q6GPI1 263 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 I3L2K1 104 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 GATA3P23771 443 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 ETFRF1Q6IPR1 90 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 MEX3AA1L020 520 aaKnown RBP11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 IGSF10Q6WRI0 2623 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 FSHBP01225 129 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 RARRES2Q99969 163 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 TPSG1Q9NRR2 321 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 SLC39A9Q9NUM3 307 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 IGF2RP11717 2491 aa11.29□□□□□ -0.6
CDC42SE2-202ENST00000395246 F8W036 122 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 NBR2O15453 112 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 HLA-DRB1P01911 266 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 RNF212Q495C1 297 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 COMMD5Q9GZQ3 224 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 IFNA10P01566 189 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 ZNF616Q08AN1 781 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 RBMS3Q6XE24 437 aaKnown RBP11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 MYOD1P15172 320 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 CDKN1AP38936 164 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 RND2P52198 227 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 BPIFB3P59826 476 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 SELENOTP62341 195 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 ZNF343Q6P1L6 599 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR2T10Q8NGZ9 312 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 LPAR2Q9HBW0 351 aa11.28□□□□□ -0.6
CDC42SE2-202ENST00000395246 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 LY6HO94772 140 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 PRH1P02810 166 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 ASPHD1Q5U4P2 390 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 DYNAPQ8N1N2 210 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 C15orf54Q8N8G6 183 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 SIRT7Q9NRC8 400 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 CFAP46Q8IYW2 2715 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 CXorf1O96002 111 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 IFNA1P01562 189 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 MYCNOSP40205 109 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 NPBWR1P48145 328 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 RPS16P62249 146 aaKnown RBP11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 C9orf139Q6ZV77 190 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 RPEQ96AT9 228 aa11.27□□□□□ -0.61
CDC42SE2-202ENST00000395246 TIMM23O14925 209 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 OR4X1Q8NH49 305 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 ZNF503Q96F45 646 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 EAF1Q96JC9 268 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 COLCA2A8K830 154 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 TSPAN4O14817 238 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 SLC25A16P16260 332 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 C1QL4Q86Z23 238 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 OR10W1Q8NGF6 305 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 FAM167A-AS1Q96KT0 104 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 DOK5Q9P104 306 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 PTPRZ1P23471 2315 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 PDE6DO43924 150 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 NDUFS7O75251 213 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 CDC34P49427 236 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 MEF2BQ02080 365 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 CCL19Q99731 98 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
CDC42SE2-202ENST00000395246 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
CDC42SE2-202ENST00000395246 GATAD1Q8WUU5 269 aa11.25□□□□□ -0.61
CDC42SE2-202ENST00000395246 TREM1Q9NP99 234 aa11.25□□□□□ -0.61
CDC42SE2-202ENST00000395246 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms