RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FAM219AQ8IW50 185 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 LGI3Q8N145 548 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 NOTCH1P46531 2555 aa15.35■□□□□ 0.05
SNCA-203ENST00000394986 UPK1BO75841 260 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 IFNA17P01571 189 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 HSPB1P04792 205 aaKnown RBP15.34■□□□□ 0.05
SNCA-203ENST00000394986 OR8U8P0C7N1 319 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 MFAP2P55001 183 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 SAMD5Q5TGI4 173 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 ZNF343Q6P1L6 599 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 HSD17B13Q7Z5P4 300 aaPredicted RBP15.34■□□□□ 0.05
SNCA-203ENST00000394986 C20orf85Q9H1P6 137 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 A0A0B4J2A0 478 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 NXPH3O95157 252 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 SRPXP78539 464 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 NMSQ5H8A3 153 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 PLEKHA3Q9HB20 300 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 SHPKQ9UHJ6 478 aa15.34■□□□□ 0.05
SNCA-203ENST00000394986 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
SNCA-203ENST00000394986 NOTCH3Q9UM47 2321 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 MFSD2BA6NFX1 497 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 HLA-AP01891 365 aaKnown RBP15.33■□□□□ 0.04
SNCA-203ENST00000394986 OR4E1P0C645 316 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 SLC25A24Q6NUK1 477 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 OR2C3Q8N628 320 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 DCUN1D4Q92564 292 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 DLX4Q92988 240 aaPredicted RBP15.33■□□□□ 0.04
SNCA-203ENST00000394986 PDCD10Q9BUL8 212 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 PEF1Q9UBV8 284 aaKnown RBP15.33■□□□□ 0.04
SNCA-203ENST00000394986 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
SNCA-203ENST00000394986 MEGF8Q7Z7M0 2845 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 TRAV6A0A075B6T7 132 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 C9orf170A2RU37 121 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 TCRBP04435 133 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 HOXD3P31249 432 aaPredicted RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 HOXA1P49639 335 aaPredicted RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 UBE2MP61081 183 aaKnown RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 ASAH1Q13510 395 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 RCC1LQ96I51 464 aaKnown RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 CCDC140Q96MF4 163 aa15.32■□□□□ 0.04
SNCA-203ENST00000394986 RANGRFQ9HD47 186 aaPredicted RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.32■□□□□ 0.04
SNCA-203ENST00000394986 IGHV3-21A0A0B4J1V1 117 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 SULT1A3P0DMM9 295 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 SULT1A4P0DMN0 295 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 DHRS2Q13268 280 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 AARDQ4LEZ3 155 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 C11orf87Q6NUJ2 197 aa15.31■□□□□ 0.04
SNCA-203ENST00000394986 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.3■□□□□ 0.04
SNCA-203ENST00000394986 PPP5D1E7EU14 171 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 BMPR1BO00238 502 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 C4orf46Q504U0 113 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 LYG2Q86SG7 212 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 LRTM2Q8N967 370 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 OR52B4Q8NGK2 314 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 NUDT15Q9NV35 164 aa15.3■□□□□ 0.04
SNCA-203ENST00000394986 FAM240BA0A1B0GVZ2 78 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 HOXB5P09067 269 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 SPCS3P61009 180 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 BEAN1Q3B7T3 259 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 MZT2BQ6NZ67 158 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 CLEC19AQ6UXS0 136 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 OR1P1Q8NH06 330 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 EEF1AKMT3Q96AZ1 226 aa15.29■□□□□ 0.04
SNCA-203ENST00000394986 OVOL1O14753 267 aa15.28■□□□□ 0.04
SNCA-203ENST00000394986 ERHP84090 104 aaKnown RBP15.28■□□□□ 0.04
SNCA-203ENST00000394986 SMCO1Q147U7 214 aa15.28■□□□□ 0.04
SNCA-203ENST00000394986 ZNF114Q8NC26 417 aa15.28■□□□□ 0.04
SNCA-203ENST00000394986 OR52E5Q8NH55 327 aa15.28■□□□□ 0.04
SNCA-203ENST00000394986 MISP3Q96FF7 219 aa15.28■□□□□ 0.04
SNCA-203ENST00000394986 DUXBA0A1W2PPF3 345 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 SEC14L6B5MCN3 397 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 CYB5BO43169 146 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 ADAP1O75689 374 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 ZP3P21754 424 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 RPEL1Q2QD12 228 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 GGNBP1Q5YKI7 109 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 ZNF502Q8TBZ5 544 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 ENY2Q9NPA8 101 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 ZC4H2Q9NQZ6 224 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 THYN1Q9P016 225 aa15.27■□□□□ 0.04
SNCA-203ENST00000394986 CEBPZOSA8MTT3 80 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 INS-IGF2F8WCM5 200 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 K7EIM0 57 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 DUS4LO95620 317 aaKnown RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 PRB2P02812 416 aaPredicted RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 SYNJ2BPP57105 145 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 OR1S1Q8NH92 325 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 CXorf58Q96LI9 332 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 SEC22CQ9BRL7 303 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 MCRIP2Q9BUT9 160 aaKnown RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 A0A1B0GU03 582 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 H2AFB2P0C5Z0 115 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 RNASE2P10153 161 aaKnown RBP15.26■□□□□ 0.03
SNCA-203ENST00000394986 GPR183P32249 361 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 SNCAP37840 140 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 DEFA6Q01524 100 aa15.26■□□□□ 0.03
SNCA-203ENST00000394986 KLF5Q13887 457 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms