RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 A0A1W2PRD5 423 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 A0A1W2PRF3 423 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 A0A1W2PRM7 423 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 BUB1B-PAK6H3BSN5 160 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 MPDU1O75352 247 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 FOXH1O75593 365 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 IFNA1P01562 189 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 PSMB3P49720 205 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 GAMTQ14353 236 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 OR1L8Q8NGR8 309 aa12.15□□□□□ -0.46
GPC3-202ENST00000394299 NEIL1Q96FI4 390 aaPredicted RBP12.15□□□□□ -0.46
GPC3-202ENST00000394299 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 NPPCP23582 126 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 OR51G1Q8NGK1 321 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 INSIG2Q9Y5U4 225 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 ACTL6BO94805 426 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 SFTPCP11686 197 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 USF1P22415 310 aaPredicted RBP12.14□□□□□ -0.47
GPC3-202ENST00000394299 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
GPC3-202ENST00000394299 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 C2orf83Q53S99 150 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 P2RX4Q99571 388 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 MIOXQ9UGB7 285 aa12.14□□□□□ -0.47
GPC3-202ENST00000394299 IGHV1-3A0A0C4DH29 117 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 LINC00869P0C866 280 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 RPL35P42766 123 aaKnown RBP12.13□□□□□ -0.47
GPC3-202ENST00000394299 ATP5G3P48201 142 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 PRRX1P54821 245 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 LGALS4P56470 323 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 FLI1Q01543 452 aaPredicted RBP12.13□□□□□ -0.47
GPC3-202ENST00000394299 KLRD1Q13241 179 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 RAB1CQ92928 201 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 HABP2Q14520 560 aaPredicted RBP12.13□□□□□ -0.47
GPC3-202ENST00000394299 YPEL4Q96NS1 127 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 SSX3Q99909 188 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 PCGF1Q9BSM1 259 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 ABCA1O95477 2261 aa12.13□□□□□ -0.47
GPC3-202ENST00000394299 ACACBO00763 2458 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 CD24P25063 80 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 OR10J1P30954 320 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 MC5RP33032 325 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 HCP5Q6MZN7 132 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 C12orf57Q99622 126 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 SMIM7Q9BQ49 75 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
GPC3-202ENST00000394299 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 ZFHX3Q15911 3703 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 A0A1W2PPI3 338 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 C11orf94C9JXX5 98 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 CXCL1P09341 107 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 RAB5AP20339 215 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 IL3RAP26951 378 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 RAB13P51153 203 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 ERHP84090 104 aaKnown RBP12.12□□□□□ -0.47
GPC3-202ENST00000394299 PRR20EP86478 221 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 PRR20CP86479 221 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 PRR20DP86480 221 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 PRR20BP86481 221 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 PRR20AP86496 221 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 TIMD4Q96H15 378 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 PARLQ9H300 379 aa12.12□□□□□ -0.47
GPC3-202ENST00000394299 MRPL36Q9P0J6 103 aaKnown RBP12.12□□□□□ -0.47
GPC3-202ENST00000394299 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 FSTL3O95633 263 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 LIPFP07098 398 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 STAG3L3P0CL85 134 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 AKR1D1P51857 326 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 CD69Q07108 199 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 MIR17HGQ75NE6 70 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 TMEM144Q7Z5S9 345 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 AURKAIP1Q9NWT8 199 aaPredicted RBP12.11□□□□□ -0.47
GPC3-202ENST00000394299 SLC45A2Q9UMX9 530 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 HILPDAQ9Y5L2 63 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 FCN1O00602 326 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
GPC3-202ENST00000394299 GNB1P62873 340 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 C4orf17Q53FE4 359 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 LHFPL4Q7Z7J7 247 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 DTX2Q86UW9 622 aa12.11□□□□□ -0.47
GPC3-202ENST00000394299 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms