RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 DNAH9Q9NYC9 4486 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 ANKRD20A5PA0PJZ0 165 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 IZUMO1RA6ND01 250 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 C2orf70A6NJV1 201 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 ATG12O94817 140 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 OR51S1Q8NGJ8 323 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 PRRT1Q99946 306 aa23.32■■□□□ 1.32
CMTM4-202ENST00000394106 RTBDNQ9BSG5 229 aaPredicted RBP23.32■■□□□ 1.32
CMTM4-202ENST00000394106 FOLR2P14207 255 aa23.31■■□□□ 1.32
CMTM4-202ENST00000394106 PRCDQ00LT1 54 aa23.31■■□□□ 1.32
CMTM4-202ENST00000394106 PLET1Q6UQ28 207 aa23.31■■□□□ 1.32
CMTM4-202ENST00000394106 TEX13DA0A0J9YY54 714 aaPredicted RBP23.3■■□□□ 1.32
CMTM4-202ENST00000394106 FRMD6-AS1P0C7T7 363 aa23.3■■□□□ 1.32
CMTM4-202ENST00000394106 HSPE1P61604 102 aaKnown RBP23.3■■□□□ 1.32
CMTM4-202ENST00000394106 SURF2Q15527 256 aaPredicted RBP23.3■■□□□ 1.32
CMTM4-202ENST00000394106 SPINK9Q5DT21 86 aa23.3■■□□□ 1.32
CMTM4-202ENST00000394106 Q8N1Y9 231 aa23.3■■□□□ 1.32
CMTM4-202ENST00000394106 OR1L6Q8NGR2 347 aa23.3■■□□□ 1.32
CMTM4-202ENST00000394106 RBM38Q9H0Z9 239 aaKnown RBP23.3■■□□□ 1.32
CMTM4-202ENST00000394106 IGHV3-35A0A0C4DH35 117 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 UCP1P25874 307 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 CD300EQ496F6 205 aaPredicted RBP23.29■■□□□ 1.32
CMTM4-202ENST00000394106 OR2C3Q8N628 320 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 OR2K2Q8NGT1 345 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 RNASE11Q8TAA1 199 aaKnown RBP23.29■■□□□ 1.32
CMTM4-202ENST00000394106 CACNG8Q8WXS5 425 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 THAP7Q9BT49 309 aaPredicted RBP23.29■■□□□ 1.32
CMTM4-202ENST00000394106 C5orf66Q9H5L9 145 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 PLEKHA3Q9HB20 300 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 MCUBQ9NWR8 336 aa23.29■■□□□ 1.32
CMTM4-202ENST00000394106 OR2T8A6NH00 312 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 B3GALNT1O75752 331 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 OR5AC1P0C628 307 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 P0C879 139 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 PYDC2Q56P42 97 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 SGPP2Q8IWX5 399 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 OR1P1Q8NH06 330 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 SCARB1Q8WTV0 552 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 NAA60Q9H7X0 242 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 C21orf62Q9NYP8 219 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 GPR132Q9UNW8 380 aa23.28■■□□□ 1.32
CMTM4-202ENST00000394106 A0A0B4J293 547 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 TGOLN2O43493 480 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 S100A5P33763 92 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 DEFB114Q30KQ6 69 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 GTSCR1Q86UQ5 136 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 SBSPONQ8IVN8 264 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 UBAC2Q8NBM4 344 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 RRNAD1Q96FB5 475 aaKnown RBP23.27■■□□□ 1.32
CMTM4-202ENST00000394106 MISP3Q96FF7 219 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 TMEM222Q9H0R3 208 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 SCP2D1Q9UJQ7 156 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 SELENOKQ9Y6D0 94 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 U3KQK5 164 aa23.27■■□□□ 1.32
CMTM4-202ENST00000394106 K7EIM0 57 aa23.26■■□□□ 1.31
CMTM4-202ENST00000394106 IGHV4-30-4P0DP06 118 aa23.26■■□□□ 1.31
CMTM4-202ENST00000394106 CBLN1P23435 193 aa23.26■■□□□ 1.31
CMTM4-202ENST00000394106 UNQ9165/PRO28630Q6UXU0 137 aa23.26■■□□□ 1.31
CMTM4-202ENST00000394106 SLC2A8Q9NY64 477 aa23.26■■□□□ 1.31
CMTM4-202ENST00000394106 TMEM213A2RRL7 107 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 A8MWP6 167 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 ST8SIA3O43173 380 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 IFNA17P01571 189 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 ERHP84090 104 aaKnown RBP23.25■■□□□ 1.31
CMTM4-202ENST00000394106 Q56UQ5 140 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 SLC35G3Q8N808 338 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 PDCD10Q9BUL8 212 aa23.25■■□□□ 1.31
CMTM4-202ENST00000394106 A0A0G2JRQ6 117 aa23.24■■□□□ 1.31
CMTM4-202ENST00000394106 TM4SF20Q53R12 229 aa23.24■■□□□ 1.31
CMTM4-202ENST00000394106 GLYATL2Q8WU03 294 aa23.24■■□□□ 1.31
CMTM4-202ENST00000394106 BSCL2Q96G97 398 aaPredicted RBP23.24■■□□□ 1.31
CMTM4-202ENST00000394106 PALMDQ9NP74 551 aa23.24■■□□□ 1.31
CMTM4-202ENST00000394106 TECRQ9NZ01 308 aaKnown RBP23.24■■□□□ 1.31
CMTM4-202ENST00000394106 V9GYH0 126 aa23.24■■□□□ 1.31
CMTM4-202ENST00000394106 CRYM-AS1A6NIL9 109 aa23.23■■□□□ 1.31
CMTM4-202ENST00000394106 GUCA2BQ16661 112 aa23.23■■□□□ 1.31
CMTM4-202ENST00000394106 UXS1Q8NBZ7 420 aa23.23■■□□□ 1.31
CMTM4-202ENST00000394106 ZNF114Q8NC26 417 aa23.23■■□□□ 1.31
CMTM4-202ENST00000394106 ZNF701M0R085 212 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-202ENST00000394106 CDS2O95674 445 aa23.22■■□□□ 1.31
CMTM4-202ENST00000394106 DHODHQ02127 395 aa23.22■■□□□ 1.31
CMTM4-202ENST00000394106 LHFPL5Q8TAF8 219 aa23.22■■□□□ 1.31
CMTM4-202ENST00000394106 ZNF436Q9C0F3 470 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-202ENST00000394106 ETV6P41212 452 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 SPSB3Q6PJ21 355 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 RBPMSQ93062 196 aaKnown RBP23.21■■□□□ 1.31
CMTM4-202ENST00000394106 TRIM63Q969Q1 353 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 PINX1Q96BK5 328 aaKnown RBP23.21■■□□□ 1.31
CMTM4-202ENST00000394106 SCGB3A2Q96PL1 93 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 CHRDL1Q9BU40 450 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 MLXQ9UH92 298 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 UFC1Q9Y3C8 167 aa23.21■■□□□ 1.31
CMTM4-202ENST00000394106 ZNF785A8K8V0 405 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 F8W735 103 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-202ENST00000394106 SNCAP37840 140 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 HOXA1P49639 335 aaPredicted RBP23.2■■□□□ 1.3
CMTM4-202ENST00000394106 CD81P60033 236 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 ZNF79Q15937 498 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 TMEM268Q5VZI3 342 aa23.2■■□□□ 1.3
CMTM4-202ENST00000394106 SELENOHQ8IZQ5 122 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms