RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 OOSP1A8MZH6 123 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 NDUFS8O00217 210 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 CYB5BO43169 146 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 SUB1P53999 127 aaKnown RBP eCLIP17.8■□□□□ 0.44
HMGA2-203ENST00000393578 BTN1A1Q13410 526 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 RAB31Q13636 194 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 CCDC144NLQ6NUI1 221 aa17.8■□□□□ 0.44
HMGA2-203ENST00000393578 TOX4O94842 621 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 SNAPINO95295 136 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 FGF8P55075 233 aaPredicted RBP17.79■□□□□ 0.44
HMGA2-203ENST00000393578 SRSF1Q07955 248 aaKnown RBP eCLIP17.79■□□□□ 0.442e-12■■□□□ 12.5
HMGA2-203ENST00000393578 POLR3KQ9Y2Y1 108 aaPredicted RBP17.79■□□□□ 0.44
HMGA2-203ENST00000393578 OR13C7P0DN81 318 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 RPL27AP46776 148 aaKnown RBP17.79■□□□□ 0.44
HMGA2-203ENST00000393578 COMPP49747 757 aaPredicted RBP17.79■□□□□ 0.44
HMGA2-203ENST00000393578 PMS2P11Q13670 270 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 ICAM4Q14773 271 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 TNXAQ16473 311 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 KHDC3LQ587J8 217 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 C10orf105Q8TEF2 133 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 CACNG8Q8WXS5 425 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 SLC25A22Q9H936 323 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 GNG13Q9P2W3 67 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 PXMP4Q9Y6I8 212 aa17.79■□□□□ 0.44
HMGA2-203ENST00000393578 A0A1W2PRD5 423 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 A0A1W2PRF3 423 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 A0A1W2PRM7 423 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 GPX4P36969 197 aaPredicted RBP17.78■□□□□ 0.44
HMGA2-203ENST00000393578 ATP5J2P56134 94 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 LGALS4P56470 323 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 TMEM144Q7Z5S9 345 aa17.78■□□□□ 0.44
HMGA2-203ENST00000393578 RNASEH2CQ8TDP1 164 aaKnown RBP17.78■□□□□ 0.44
HMGA2-203ENST00000393578 HSPB1P04792 205 aaKnown RBP17.77■□□□□ 0.44
HMGA2-203ENST00000393578 CD69Q07108 199 aa17.77■□□□□ 0.44
HMGA2-203ENST00000393578 FAM122CQ6P4D5 195 aa17.77■□□□□ 0.44
HMGA2-203ENST00000393578 RAB24Q969Q5 203 aa17.77■□□□□ 0.44
HMGA2-203ENST00000393578 FBXL15Q9H469 300 aa17.77■□□□□ 0.44
HMGA2-203ENST00000393578 ASH1LQ9NR48 2969 aaKnown RBP17.77■□□□□ 0.43
HMGA2-203ENST00000393578 LOC102723971A0A1B0GUV8 181 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 IGLC7A0M8Q6 106 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 SEC14L6B5MCN3 397 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 MOSP00540 346 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 GAMTQ14353 236 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 SSX2Q16385 188 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 CLEC2AQ6UVW9 174 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 P2RX4Q99571 388 aa17.77■□□□□ 0.43
HMGA2-203ENST00000393578 YIF1AO95070 293 aa17.76■□□□□ 0.43
HMGA2-203ENST00000393578 COX6B1P14854 86 aa17.76■□□□□ 0.43
HMGA2-203ENST00000393578 RPL29P47914 159 aaKnown RBP17.76■□□□□ 0.43
HMGA2-203ENST00000393578 UBE2E1P51965 193 aa17.76■□□□□ 0.43
HMGA2-203ENST00000393578 MIC13Q5XKP0 118 aa17.76■□□□□ 0.43
HMGA2-203ENST00000393578 TBX15Q96SF7 602 aa17.76■□□□□ 0.43
HMGA2-203ENST00000393578 TBL2Q9Y4P3 447 aaKnown RBP17.76■□□□□ 0.43
HMGA2-203ENST00000393578 VWC2LB2RUY7 222 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 BCL2P10415 239 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 CDC34P49427 236 aaPredicted RBP17.75■□□□□ 0.43
HMGA2-203ENST00000393578 MMDQ15546 238 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 ZFP92A6NM28 416 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 IFNA1P01562 189 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 SRP19P09132 144 aaKnown RBP17.75■□□□□ 0.43
HMGA2-203ENST00000393578 PLGLAQ15195 96 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 GCSAMLQ5JQS6 135 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 ZNF114Q8NC26 417 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 NPBQ8NG41 125 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 RXFP4Q8TDU9 374 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 SSMEM1Q8WWF3 244 aa17.75■□□□□ 0.43
HMGA2-203ENST00000393578 NBR2O15453 112 aa17.74■□□□□ 0.43
HMGA2-203ENST00000393578 B2MP61769 119 aa17.74■□□□□ 0.43
HMGA2-203ENST00000393578 GNB1P62873 340 aa17.74■□□□□ 0.43
HMGA2-203ENST00000393578 SOHLH1Q5JUK2 328 aa17.74■□□□□ 0.43
HMGA2-203ENST00000393578 RBMS3Q6XE24 437 aaKnown RBP17.74■□□□□ 0.43
HMGA2-203ENST00000393578 SLC16A13Q7RTY0 426 aa17.74■□□□□ 0.43
HMGA2-203ENST00000393578 EAF1Q96JC9 268 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-203ENST00000393578 HMGB3O15347 200 aaKnown RBP17.73■□□□□ 0.43
HMGA2-203ENST00000393578 EIF3GO75821 320 aaKnown RBP eCLIP17.73■□□□□ 0.43
HMGA2-203ENST00000393578 SNRNP70P08621 437 aaKnown RBP17.73■□□□□ 0.43
HMGA2-203ENST00000393578 DYNAPQ8N1N2 210 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 STPG3Q8N7X2 389 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.73■□□□□ 0.43
HMGA2-203ENST00000393578 OR2T10Q8NGZ9 312 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 SUN5Q8TC36 379 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 IGHV4-61A0A0C4DH41 118 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 A0A1W2PPV4 95 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 NDUFA3O95167 84 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PAX6P26367 422 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 NPBWR1P48145 328 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PRR20EP86478 221 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PRR20CP86479 221 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PRR20DP86480 221 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PRR20BP86481 221 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PRR20AP86496 221 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 MLANAQ16655 118 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 PVRIGQ6DKI7 326 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 CLRN3Q8NCR9 226 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 SLC35E1Q96K37 410 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 LPAR2Q9HBW0 351 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 VAX2Q9UIW0 290 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 SLC45A2Q9UMX9 530 aa17.73■□□□□ 0.43
HMGA2-203ENST00000393578 WNK2Q9Y3S1 2297 aa17.72■□□□□ 0.43
HMGA2-203ENST00000393578 IGKV1OR2-108A0A075B7D4 117 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms