RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ELLP55199 621 aaPredicted RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 ATP5IP56385 69 aaPredicted RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 DLK1P80370 383 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 AKR1C1Q04828 323 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 VWC2Q2TAL6 325 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 FBLN7Q53RD9 439 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 C2orf83Q53S99 150 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 BRD3OSQ6XYD6 125 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 NPBQ8NG41 125 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 AJUBAQ96IF1 538 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 PSMG3Q9BT73 122 aaPredicted RBP6.91□□□□□ -1.3
TDP1-203ENST00000393454 GGACTQ9BVM4 153 aa6.91□□□□□ -1.3
TDP1-203ENST00000393454 PRSS46E5RG02 174 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 C17orf112F2Z3M2 114 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 HSD17B13Q7Z5P4 300 aaPredicted RBP6.9□□□□□ -1.3
TDP1-203ENST00000393454 ABHD5Q8WTS1 349 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 NPCDR1Q9BY65 106 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 NPVFQ9HCQ7 196 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
TDP1-203ENST00000393454 APCP25054 2843 aa6.9□□□□□ -1.31
TDP1-203ENST00000393454 INS-IGF2F8WCM5 200 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 NDUFA3O95167 84 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 TGFAP01135 160 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 SERF2P84101 59 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 C5orf64Q2M2E5 130 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 BSXQ3C1V8 233 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
TDP1-203ENST00000393454 FFAR4Q5NUL3 377 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 TREML4Q6UXN2 200 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 NAV3Q8IVL0 2385 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 SSMEM1Q8WWF3 244 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 SRSF12Q8WXF0 261 aaKnown RBP6.89□□□□□ -1.31
TDP1-203ENST00000393454 Q96MF0 132 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 P2RX4Q99571 388 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 VSIRQ9H7M9 311 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 WDR83OSQ9Y284 106 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 FAM96BQ9Y3D0 163 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 A0A096LNT2 108 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 IGLC7A0M8Q6 106 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 RAB19A4D1S5 217 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 NUDT19A8MXV4 375 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 AREGP15514 252 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 GATA3P23771 443 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 LOXL1Q08397 574 aaPredicted RBP6.89□□□□□ -1.31
TDP1-203ENST00000393454 EBI3Q14213 229 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 FXYD3Q14802 87 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 MLANAQ16655 118 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 SFT2D1Q8WV19 159 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 NARS2Q96I59 477 aaKnown RBP6.89□□□□□ -1.31
TDP1-203ENST00000393454 RPRMQ9NS64 109 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 C1RLQ9NZP8 487 aa6.89□□□□□ -1.31
TDP1-203ENST00000393454 GCN1Q92616 2671 aaKnown RBP6.89□□□□□ -1.31
TDP1-203ENST00000393454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.88□□□□□ -1.312e-9■■■■■ 31.2
TDP1-203ENST00000393454 A0A0U1RQK1 487 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MPDU1O75352 247 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MDKP21741 143 aaPredicted RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 OPRK1P41145 380 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 RAB2AP61019 212 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 TOR2AQ5JU69 321 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 TEPPQ6URK8 271 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 Q8N6K4 173 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MBD6Q96DN6 1003 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 C1orf159Q96HA4 380 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 SLC35E1Q96K37 410 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 FAM103A1Q9BTL3 118 aaKnown RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 AVPP01185 164 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MBP02144 154 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 SSBP2P81877 361 aaPredicted RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 CD69Q07108 199 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 RAB31Q13636 194 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 GAMTQ14353 236 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 ACSM6Q6P461 480 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 C19orf35Q6ZS72 473 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 SLC16A13Q7RTY0 426 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 CENPVQ7Z7K6 275 aaPredicted RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 EIF4E3Q8N5X7 224 aaKnown RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 OR2T6Q8NHC8 308 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 RNASEH2CQ8TDP1 164 aaKnown RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 ACY3Q96HD9 319 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 MGST2Q99735 147 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 RASL11BQ9BPW5 248 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 TMEM231Q9H6L2 316 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 TREM1Q9NP99 234 aa6.88□□□□□ -1.31
TDP1-203ENST00000393454 SOX21Q9Y651 276 aaPredicted RBP6.88□□□□□ -1.31
TDP1-203ENST00000393454 IGHV3-48P01763 117 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 DEFA4P12838 97 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 GPX4P36969 197 aaPredicted RBP6.87□□□□□ -1.31
TDP1-203ENST00000393454 CX3CL1P78423 397 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
TDP1-203ENST00000393454 BPIFCQ8NFQ6 507 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms