RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TOMM5Q8N4H5 51 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR9G4Q8NGQ1 327 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 RNASE11Q8TAA1 199 aaKnown RBP5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 LSM10Q969L4 123 aaKnown RBP5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 EEF1AKMT3Q96AZ1 226 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR4C12Q96R67 309 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 SRRQ9GZT4 340 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 FAM212BQ9NTI7 297 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 SLC2A8Q9NY64 477 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 GPR132Q9UNW8 380 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF256Q9Y2P7 627 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 HUWE1Q7Z6Z7 4374 aaKnown RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ST8SIA3O43173 380 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 IGHV3-48P01763 117 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 CLEC3BP05452 202 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 CSN3P07498 182 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 FGF2P09038 288 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 HIST1H1BP16401 226 aaKnown RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 AKR1C4P17516 323 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ETV6P41212 452 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 PRCDQ00LT1 54 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SURF2Q15527 256 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 BAK1Q16611 211 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SPANXN2Q5MJ10 180 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 TMEM268Q5VZI3 342 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF57Q68EA5 555 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ADAMTSL5Q6ZMM2 481 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 Q6ZRM9 215 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 TMED4Q7Z7H5 227 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SELENOHQ8IZQ5 122 aaKnown RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR5B3Q8NH48 314 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF502Q8TBZ5 544 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 GLYATL2Q8WU03 294 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 CACNG8Q8WXS5 425 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 TSC22D3Q99576 134 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SDHCQ99643 169 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SRSF8Q9BRL6 282 aaKnown RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 ELOVL1Q9BW60 279 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 TMEM222Q9H0R3 208 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 SCP2D1Q9UJQ7 156 aa5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 F11RQ9Y624 299 aaKnown RBP5.84□□□□□ -1.47
HMGB3P1-201ENST00000393368 TNCP24821 2201 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGHV3OR16-8A0A075B7F1 116 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZNF320A2RRD8 509 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 IZUMO1RA6ND01 250 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 OR2T8A6NH00 312 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 F8W735 103 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 K7EIM0 57 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 GGCTO75223 188 aaKnown RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 CDS2O95674 445 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 IFNA17P01571 189 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGLV1-51P01701 117 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 GP9P14770 177 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 HOXA1P49639 335 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 INSL3P51460 131 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 CCR6P51684 374 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 HSPE1P61604 102 aaKnown RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 SUPT4H1P63272 117 aaKnown RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM187Q14656 261 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 KLK9Q2XQG4 91 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 THOC7Q6I9Y2 204 aaKnown RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 UNQ9165/PRO28630Q6UXU0 137 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 SGPP2Q8IWX5 399 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 CADM3Q8N126 398 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 OR2C3Q8N628 320 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 SLC35G3Q8N808 338 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 UBAC2Q8NBM4 344 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 SCARB1Q8WTV0 552 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 GPR146Q96CH1 333 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 RRNAD1Q96FB5 475 aaKnown RBP5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 MISP3Q96FF7 219 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM56Q96MV1 263 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 PLEKHA3Q9HB20 300 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 FKBP11Q9NYL4 201 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 CACNG5Q9UF02 275 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 KLK9Q9UKQ9 250 aa5.83□□□□□ -1.48
HMGB3P1-201ENST00000393368 TRBV7-1A0A0A6YYK4 115 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 FAUP35544 74 aaKnown RBP5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 AP3S2P59780 193 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 DHODHQ02127 395 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 TM4SF20Q53R12 229 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 Q56UQ5 140 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 TRIQKQ629K1 86 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 LYZL2Q7Z4W2 148 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 HSD17B13Q7Z5P4 300 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 RBPMSQ93062 196 aaKnown RBP5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 PINX1Q96BK5 328 aaKnown RBP5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 CXorf58Q96LI9 332 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 ASCL2Q99929 193 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 CHRDL1Q9BU40 450 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 C21orf62Q9NYP8 219 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 LSM4Q9Y4Z0 139 aaKnown RBP5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM56-RWDD3S4R434 201 aa5.82□□□□□ -1.48
HMGB3P1-201ENST00000393368 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM213A2RRL7 107 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 C2orf70A6NJV1 201 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 I3L2K1 104 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 CYB5BO43169 146 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 TGOLN2O43493 480 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms