RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 C1orf122Q6ZSJ8 110 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 SLC35E3Q7Z769 313 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 PNKDQ8N490 385 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 OR10W1Q8NGF6 305 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 CACNG8Q8WXS5 425 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 RNF5Q99942 180 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 NIPSNAP3BQ9BS92 247 aa16.18■□□□□ 0.18
PTPN11-202ENST00000392597 GCN1Q92616 2671 aaKnown RBP16.18■□□□□ 0.18
PTPN11-202ENST00000392597 USP9YO00507 2555 aaPredicted RBP16.17■□□□□ 0.18
PTPN11-202ENST00000392597 GOSR1O95249 250 aa16.17■□□□□ 0.18
PTPN11-202ENST00000392597 EFNA4P52798 201 aa16.17■□□□□ 0.18
PTPN11-202ENST00000392597 DLX1P56177 255 aa16.17■□□□□ 0.18
PTPN11-202ENST00000392597 MEF2BQ02080 365 aaPredicted RBP16.17■□□□□ 0.18
PTPN11-202ENST00000392597 FAM90A2PQ658T7 463 aa16.17■□□□□ 0.18
PTPN11-202ENST00000392597 MMD2Q8IY49 270 aa16.17■□□□□ 0.18
PTPN11-202ENST00000392597 A0A1W2PPV4 95 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 GPX4P36969 197 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-202ENST00000392597 CDKN1AP38936 164 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 CEBPGP53567 150 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 AKIRIN2Q53H80 203 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 MIC13Q5XKP0 118 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 MOB3BQ86TA1 216 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 MRPL41Q8IXM3 137 aaKnown RBP16.16■□□□□ 0.18
PTPN11-202ENST00000392597 KIR3DL3Q8N743 410 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 C15orf54Q8N8G6 183 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 DOPEY2Q9Y3R5 2298 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 IGHV3-72A0A0B4J1Y9 119 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 CGB1A6NKQ9 187 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 HMGB3O15347 200 aaKnown RBP16.16■□□□□ 0.18
PTPN11-202ENST00000392597 CRYGBP07316 175 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 PRTN3P24158 256 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 MAS1LP35410 378 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 SUB1P53999 127 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTPN11-202ENST00000392597 B2MP61769 119 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 MRGPRG-AS1Q2M3A8 158 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 TVP23CQ96ET8 276 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 RITA1Q96K30 269 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 C20orf24Q9BUV8 137 aa16.16■□□□□ 0.18
PTPN11-202ENST00000392597 E7EUB6 86 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRR20EP86478 221 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRR20CP86479 221 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRR20DP86480 221 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRR20BP86481 221 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRR20AP86496 221 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 CD69Q07108 199 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 PRSS8Q16651 343 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 GCSAMLQ5JQS6 135 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 STPG3Q8N7X2 389 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 RNASEH2CQ8TDP1 164 aaKnown RBP16.15■□□□□ 0.18
PTPN11-202ENST00000392597 TMPRSS5Q9H3S3 457 aa16.15■□□□□ 0.18
PTPN11-202ENST00000392597 TMEM250H0YL14 139 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 EIF3GO75821 320 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPN11-202ENST00000392597 CD81P60033 236 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 ARF6P62330 175 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 WT1-ASQ06250 92 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 TPTE2P1Q5T6R2 138 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 SPOCK3Q9BQ16 436 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 A0A087WWC5 75 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 A0A1W2PPI3 338 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 COLCA2A8K830 154 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 HTR1DP28221 377 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 CEACAM3P40198 252 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 PNRC1Q12796 327 aaPredicted RBP16.14■□□□□ 0.17
PTPN11-202ENST00000392597 GAMTQ14353 236 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 PSG5Q15238 335 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 SSMEM1Q8WWF3 244 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 TPSG1Q9NRR2 321 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 DPM3Q9P2X0 92 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 SLC45A2Q9UMX9 530 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 SIGLEC9Q9Y336 463 aa16.14■□□□□ 0.17
PTPN11-202ENST00000392597 AKR1C3P42330 323 aa16.13■□□□□ 0.17
PTPN11-202ENST00000392597 PRB3Q04118 309 aaPredicted RBP16.13■□□□□ 0.17
PTPN11-202ENST00000392597 C10orf55Q5SWW7 151 aa16.13■□□□□ 0.17
PTPN11-202ENST00000392597 A1L4Q6 167 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 ODF3BA8MYP8 253 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 B4DEV8 164 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 STAG3L2P0CL84 134 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 STAG3L3P0CL85 134 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 RHOBP62745 196 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 SLC35E1Q96K37 410 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 ACTL6BO94805 426 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 DEFA4P12838 97 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 SLC16A13Q7RTY0 426 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 ZNF114Q8NC26 417 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 SIRT7Q9NRC8 400 aa16.12■□□□□ 0.17
PTPN11-202ENST00000392597 OVOL3O00110 214 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 NDUFS7O75251 213 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 CXorf1O96002 111 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 IGHV2-5P01817 119 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 LINC00869P0C866 280 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 RPL27AP46776 148 aaKnown RBP16.11■□□□□ 0.17
PTPN11-202ENST00000392597 PVRIGQ6DKI7 326 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 IQCF2Q8IXL9 164 aa16.11■□□□□ 0.17
PTPN11-202ENST00000392597 IGLC7A0M8Q6 106 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 COMPP49747 757 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-202ENST00000392597 HABP2Q14520 560 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-202ENST00000392597 HCP5Q6MZN7 132 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 PPP1R27Q86WC6 154 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 NANPQ8TBE9 248 aa16.1■□□□□ 0.17
PTPN11-202ENST00000392597 PSMG3-AS1Q96PY0 264 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms