RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 A0A1W2PRF3 423 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 A0A1W2PRM7 423 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 SCO1O75880 301 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 RPL27AP46776 148 aaKnown RBP17.11■□□□□ 0.33
SPHK1-202ENST00000392496 UBE2E1P51965 193 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 SUB1P53999 127 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPHK1-202ENST00000392496 TEPPQ6URK8 271 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 OR10G4Q8NGN3 311 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 OR10G9Q8NGN4 311 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 OR10G7Q8NGN6 311 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 MGST2Q99735 147 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 KCNIP2Q9NS61 270 aa17.11■□□□□ 0.33
SPHK1-202ENST00000392496 RBFOX3A6NFN3 312 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 M6PRP20645 277 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 COMPP49747 757 aaPredicted RBP17.1■□□□□ 0.33
SPHK1-202ENST00000392496 DEFA5Q01523 94 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 TNXAQ16473 311 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 ACOT6Q3I5F7 207 aaPredicted RBP17.1■□□□□ 0.33
SPHK1-202ENST00000392496 ZNF787Q6DD87 383 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 SSX7Q7RTT5 188 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 C1orf159Q96HA4 380 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 GGTLC1Q9BX51 225 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 SLC39A9Q9NUM3 307 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 IGHV4-61A0A0C4DH41 118 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 CTXND1A0A1B0GTU2 59 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 MOSP00540 346 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 SSX2Q16385 188 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 LCN15Q6UWW0 184 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 CACNG8Q8WXS5 425 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 ACTR3CQ9C0K3 210 aaPredicted RBP17.1■□□□□ 0.33
SPHK1-202ENST00000392496 FBXL15Q9H469 300 aa17.1■□□□□ 0.33
SPHK1-202ENST00000392496 UTP20O75691 2785 aaKnown RBP17.09■□□□□ 0.33
SPHK1-202ENST00000392496 MAP1LC3B2A6NCE7 125 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 OR13C7P0DN81 318 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 GPX4P36969 197 aaPredicted RBP17.09■□□□□ 0.33
SPHK1-202ENST00000392496 CD69Q07108 199 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 RAB31Q13636 194 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 SVBPQ8N300 66 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 NPBQ8NG41 125 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 RNASEH2CQ8TDP1 164 aaKnown RBP17.09■□□□□ 0.33
SPHK1-202ENST00000392496 MAP1LC3BQ9GZQ8 125 aa17.09■□□□□ 0.33
SPHK1-202ENST00000392496 IGLC7A0M8Q6 106 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 CYB5BO43169 146 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 DSCR9P59020 149 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 TMEM144Q7Z5S9 345 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 OR2T10Q8NGZ9 312 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 EAF1Q96JC9 268 aaPredicted RBP17.08■□□□□ 0.33
SPHK1-202ENST00000392496 P2RX4Q99571 388 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 LPAR2Q9HBW0 351 aa17.08■□□□□ 0.33
SPHK1-202ENST00000392496 PTPN13Q12923 2485 aa17.08■□□□□ 0.32
SPHK1-202ENST00000392496 NBR2O15453 112 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 NDUFA3O95167 84 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PPT1P50897 306 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PMS2P11Q13670 270 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 MMDQ15546 238 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 ZNF506Q5JVG8 444 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 DYNAPQ8N1N2 210 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 ZNF114Q8NC26 417 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 MALSU1Q96EH3 234 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 RARRES2Q99969 163 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PXMP4Q9Y6I8 212 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 IGHV4-30-2A0A087WSY4 118 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PAX8Q06710 450 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PLGLAQ15195 96 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 FAM122CQ6P4D5 195 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 PERPQ96FX8 193 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 SLC35B3Q9H1N7 401 aa17.07■□□□□ 0.32
SPHK1-202ENST00000392496 SEC14L6B5MCN3 397 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 SNRNP70P08621 437 aaKnown RBP17.06■□□□□ 0.32
SPHK1-202ENST00000392496 RPL29P47914 159 aaKnown RBP17.06■□□□□ 0.32
SPHK1-202ENST00000392496 EBI3Q14213 229 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 GAMTQ14353 236 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 GUCA2BQ16661 112 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 KHDC3LQ587J8 217 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 MIC13Q5XKP0 118 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 PVRIGQ6DKI7 326 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 SLC25A22Q9H936 323 aa17.06■□□□□ 0.32
SPHK1-202ENST00000392496 YIF1AO95070 293 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 FGF8P55075 233 aaPredicted RBP17.05■□□□□ 0.32
SPHK1-202ENST00000392496 GNB1P62873 340 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 HAGHQ16775 308 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 SLC16A13Q7RTY0 426 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 SRSF8Q9BRL6 282 aaKnown RBP17.05■□□□□ 0.32
SPHK1-202ENST00000392496 LOC102723971A0A1B0GUV8 181 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 CDC34P49427 236 aaPredicted RBP17.05■□□□□ 0.32
SPHK1-202ENST00000392496 SSBP2P81877 361 aaPredicted RBP17.05■□□□□ 0.32
SPHK1-202ENST00000392496 ICAM4Q14773 271 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 ATRAIDQ6UW56 229 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 RAB24Q969Q5 203 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 SLC35E1Q96K37 410 aa17.05■□□□□ 0.32
SPHK1-202ENST00000392496 TEX22C9J3V5 150 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 FCN1O00602 326 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 HSPB1P04792 205 aaKnown RBP17.04■□□□□ 0.32
SPHK1-202ENST00000392496 PAX6P26367 422 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 HES1Q14469 280 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 Q8N6K4 173 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 C17orf50Q8WW18 174 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 SRSF12Q8WXF0 261 aaKnown RBP17.04■□□□□ 0.32
SPHK1-202ENST00000392496 NRGNQ92686 78 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 AJUBAQ96IF1 538 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms