RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 ASAH2BP0C7U1 165 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 FKBP2P26885 142 aaKnown RBP0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 PSMB6P28072 239 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 MAP3K7CLP57077 242 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 RAB4BP61018 213 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 CCL20P78556 96 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 SRSF6Q13247 344 aaKnown RBP0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 KISS1Q15726 138 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 Q6ZQT0 140 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 TMEM70Q9BUB7 260 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 NDEL1Q9GZM8 345 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 HDHD2Q9H0R4 259 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 APCP25054 2843 aa0.12□□□□□ -2.39
SNORA40.3-201ENST00000390964 CEP192Q8TEP8 1941 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 FABP12A6NFH5 140 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 CLDN25C9JDP6 229 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 SSNA1O43805 119 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 SPANXN5Q5MJ07 72 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 DEFB125Q8N687 156 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 PFN4Q8NHR9 129 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 CISHQ9NSE2 258 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 C15orf41Q9Y2V0 281 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 DCCP43146 1447 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 KMT2DO14686 5537 aa0.11□□□□□ -2.39
SNORA40.3-201ENST00000390964 MIFP14174 115 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 MAP2K4P45985 399 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 IFITM2Q01629 132 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 RSU1Q15404 277 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 COMMD7Q86VX2 200 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 OOSP2Q86WS3 158 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 DNAJB3Q8WWF6 145 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 DIRAS2Q96HU8 199 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 DERL1Q9BUN8 251 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 MAP1LC3AQ9H492 121 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 FAM96AQ9H5X1 160 aa0.1□□□□□ -2.39
SNORA40.3-201ENST00000390964 TYMSP04818 313 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 C8orf88P0DMB2 117 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 KCNJ8Q15842 424 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 AADACL3Q5VUY0 350 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 PDPK2PQ6A1A2 396 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 MCFD2Q8NI22 146 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 CNBD2Q96M20 576 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 SCGB3A1Q96QR1 104 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 C7orf50Q9BRJ6 194 aaKnown RBP0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 NAV2Q8IVL1 2488 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 DENND4CQ5VZ89 1909 aa0.09□□□□□ -2.4
SNORA40.3-201ENST00000390964 E9PCH4 1651 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 KCPQ6ZWJ8 1503 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 TOPBP1Q92547 1522 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 FRAS1Q86XX4 4008 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 RIC1Q4ADV7 1423 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 TRBV20OR9-2A0A075B6H5 130 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 A0A0J9YY10 115 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 A0A1B0GX78 115 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 PFDN6O15212 129 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 SPI1P17947 270 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 RPL12P30050 165 aaKnown RBP0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 MARCKSL1P49006 195 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 SPANXN3Q5MJ09 141 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 OR2T4Q8NH00 348 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 MIXL1Q9H2W2 232 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 IMP3Q9NV31 184 aaKnown RBP0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 PLEKHJ1Q9NW61 149 aa0.08□□□□□ -2.4
SNORA40.3-201ENST00000390964 ABCC11Q96J66 1382 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 AHNAKQ09666 5890 aaKnown RBP0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 TRBV6-8A0A0A6YYG3 113 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 A0A0D9SG52 128 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 KCNK1O00180 336 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 NCR3O14931 201 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 CRYGAP11844 174 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 COX6A1P12074 109 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 UCHL3P15374 230 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 MYL12AP19105 171 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 CNBPP62633 177 aaKnown RBP0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 RHOGP84095 191 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 GRK1Q15835 563 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 GUK1Q16774 197 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 COQ5Q5HYK3 327 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 RPL22L1Q6P5R6 122 aaKnown RBP0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 PLEKHG7Q6ZR37 379 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 CMTM5Q96DZ9 223 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 WDR61Q9GZS3 305 aaKnown RBP0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 ACER3Q9NUN7 267 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 C3orf18Q9UK00 162 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 COL1A1P02452 1464 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 MAST4O15021 2626 aa0.07□□□□□ -2.4
SNORA40.3-201ENST00000390964 KIF13BQ9NQT8 1826 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 ZNF462Q96JM2 2506 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 A0A1B0GV50 99 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 GOLGA8KD6RF30 607 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 ACOX3O15254 700 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 CALUO43852 315 aaPredicted RBP0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 BAALC-AS2P0C853 105 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BOP23527 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BBP33778 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BDP58876 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST1H2BCP62807 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 MED21Q13503 144 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST2H2BEQ16778 126 aa0.06□□□□□ -2.4
SNORA40.3-201ENST00000390964 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms