RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 KIAA1644Q3SXP7 199 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 CENPWQ5EE01 88 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 ZCCHC24Q8N2G6 241 aaKnown RBP12.5□□□□□ -0.41
SNPH-202ENST00000381873 OR10AG1Q8NH19 301 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 H3BVH4 76 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 IGHV3-23P01764 117 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 COL4A6Q14031 1691 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 DOCK7Q96N67 2140 aa12.5□□□□□ -0.41
SNPH-202ENST00000381873 ZNF362Q5T0B9 420 aaPredicted RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 IGFBP2P18065 325 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 RNASEH2CQ8TDP1 164 aaKnown RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 GEMIN7Q9H840 131 aaKnown RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 PTPRDP23468 1912 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 ZNF25P17030 456 aaPredicted RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 MESP1Q9BRJ9 268 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNPH-202ENST00000381873 YPEL1O60688 119 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 PLAURQ03405 335 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 CIRBPQ14011 172 aaKnown RBP12.49□□□□□ -0.41
SNPH-202ENST00000381873 YPEL2Q96QA6 119 aa12.49□□□□□ -0.41
SNPH-202ENST00000381873 TRBV6-7A0A0A0MS04 114 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 NHLRC3Q5JS37 347 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 OR1P1Q8NH06 330 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 SFRP2Q96HF1 295 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 NOTCH2Q04721 2471 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 NBR2O15453 112 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 TEX45Q8NA69 505 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 FBLN5Q9UBX5 448 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 MED13LQ71F56 2210 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 H7C1H1 209 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 VENTXO95231 258 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 CLEC19AQ6UXS0 136 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 ITLN2Q8WWU7 325 aaPredicted RBP12.48□□□□□ -0.41
SNPH-202ENST00000381873 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
SNPH-202ENST00000381873 DPH3Q96FX2 82 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 WNT10AQ9GZT5 417 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
SNPH-202ENST00000381873 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 PINLYPA6NC86 204 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 THBDP07204 575 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 FOLR2P14207 255 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 CD69Q07108 199 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 M0R381 172 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 CGAP01215 116 aa12.47□□□□□ -0.41
SNPH-202ENST00000381873 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
SNPH-202ENST00000381873 TRBV9A0A0B4J1U6 114 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 LYNX1G3V0Z9 82 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 LYNX1P0DP58 116 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 TIMP3P35625 211 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 H7C2G1 150 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 HBBP68871 147 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 ZNF506Q5JVG8 444 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 JMJD8Q96S16 334 aa12.46□□□□□ -0.41
SNPH-202ENST00000381873 ZNF256Q9Y2P7 627 aaPredicted RBP12.46□□□□□ -0.41
SNPH-202ENST00000381873 LGALS3P17931 250 aaKnown RBP12.46□□□□□ -0.42
SNPH-202ENST00000381873 TMEM144Q7Z5S9 345 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 SAA1P0DJI8 122 aaPredicted RBP12.46□□□□□ -0.42
SNPH-202ENST00000381873 MEIG1Q5JSS6 88 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.42
SNPH-202ENST00000381873 CCL1P22362 96 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 ERASQ7Z444 233 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 SDHCQ99643 169 aaPredicted RBP12.45□□□□□ -0.42
SNPH-202ENST00000381873 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
SNPH-202ENST00000381873 UPK2O00526 184 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
SNPH-202ENST00000381873 MYOD1P15172 320 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 ASIPP42127 132 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 COL5A1-AS1Q5SY13 56 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 OR4D5Q8NGN0 318 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 TMEM262E9PQX1 116 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 SAMD13Q5VXD3 122 aa12.45□□□□□ -0.42
SNPH-202ENST00000381873 IL18BPO95998 194 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 PPP1R17O96001 155 aa12.44□□□□□ -0.42
SNPH-202ENST00000381873 RPLP1P05386 114 aaKnown RBP12.44□□□□□ -0.42
SNPH-202ENST00000381873 SUMO2P61956 95 aaKnown RBP12.44□□□□□ -0.42
SNPH-202ENST00000381873 MORN2Q502X0 79 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms