RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 VCX3AQ9NNX9 186 aa10.53□□□□□ -0.72
SHOX-202ENST00000381575 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 C15orf61A6NNL5 157 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 M0QYG6 137 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 HPGDSO60760 199 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 JTBO76095 146 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 FGF2P09038 288 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 ELK1P19419 428 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 EWSR1Q01844 656 aaKnown RBP eCLIP10.52□□□□□ -0.72
SHOX-202ENST00000381575 PMS2P11Q13670 270 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 IZUMO4Q1ZYL8 232 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 DEFB135Q30KP9 77 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 SPINK9Q5DT21 86 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 HSD17B13Q7Z5P4 300 aaPredicted RBP10.52□□□□□ -0.72
SHOX-202ENST00000381575 OR2C3Q8N628 320 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 MISP3Q96FF7 219 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 ZNF414Q96IQ9 312 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 FUNDC2Q9BWH2 189 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.72
SHOX-202ENST00000381575 TMEM14BQ9NUH8 114 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 PRNDQ9UKY0 176 aa10.52□□□□□ -0.72
SHOX-202ENST00000381575 TNFAIP8O95379 198 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
SHOX-202ENST00000381575 SPSB3Q6PJ21 355 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 SLC38A6Q8IZM9 456 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 MRGPRFQ96AM1 343 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 SEC22AQ96IW7 307 aa10.52□□□□□ -0.73
SHOX-202ENST00000381575 SPAG8Q99932 426 aaPredicted RBP10.52□□□□□ -0.73
SHOX-202ENST00000381575 AGRNO00468 2067 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 A0A0J9YWU9 116 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 NDUFA4O00483 81 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 TSPAN4O14817 238 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 APOA1P02647 267 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
SHOX-202ENST00000381575 PI3P19957 117 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 ZNF124Q15973 351 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 TMEM56Q96MV1 263 aa10.51□□□□□ -0.73
SHOX-202ENST00000381575 IGKV3-7A0A075B6H7 116 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 SMIM31A0A1B0GVY4 71 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 CTSGP08311 255 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 RCVRNP35243 200 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 TFPI2P48307 235 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 H2BFWTQ7Z2G1 175 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 OR1P1Q8NH06 330 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 OR5B3Q8NH48 314 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 OR4A16Q8NH70 328 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 PINX1Q96BK5 328 aaKnown RBP10.5□□□□□ -0.73
SHOX-202ENST00000381575 RNF2Q99496 336 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 NAA50Q9GZZ1 169 aaKnown RBP10.5□□□□□ -0.73
SHOX-202ENST00000381575 FKBP11Q9NYL4 201 aa10.5□□□□□ -0.73
SHOX-202ENST00000381575 FAM25AB3EWG3 89 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 FAM25CB3EWG5 89 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 FAM25GB3EWG6 89 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 I3L2K1 104 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 YIF1AO95070 293 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 PGAM2P15259 253 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 S100GP29377 79 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 TSC22D3Q99576 134 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 SCPEP1Q9HB40 452 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 FRAS1Q86XX4 4008 aa10.49□□□□□ -0.73
SHOX-202ENST00000381575 CXorf65A6NEN9 183 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 SPRY2O43597 315 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 MT-CO2P00403 227 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 APOC4P55056 127 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 PRCDQ00LT1 54 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 LPCAT3Q6P1A2 487 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 LYG2Q86SG7 212 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 CADM3Q8N126 398 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 KLK11Q9UBX7 282 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
SHOX-202ENST00000381575 KMT2AQ03164 3969 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 IGHV7-4-1A0A0J9YVY3 117 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 OR4C46A6NHA9 309 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 K7EMT4 169 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 CHEK1O14757 476 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 NUPL2O15504 423 aaKnown RBP10.47□□□□□ -0.73
SHOX-202ENST00000381575 IGKV1-5P01602 117 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
SHOX-202ENST00000381575 PPP5CP53041 499 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 MFAP4P55083 255 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 GBGT1Q8N5D6 347 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 OR52I2Q8NH67 350 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 TP53RKQ96S44 253 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
SHOX-202ENST00000381575 CD3DP04234 171 aa10.46□□□□□ -0.74
SHOX-202ENST00000381575 UCP3P55916 312 aa10.46□□□□□ -0.74
SHOX-202ENST00000381575 HSPE1P61604 102 aaKnown RBP10.46□□□□□ -0.74
SHOX-202ENST00000381575 RELQ04864 619 aaPredicted RBP10.46□□□□□ -0.74
SHOX-202ENST00000381575 OR4D10Q8NGI6 311 aa10.46□□□□□ -0.74
SHOX-202ENST00000381575 ATP6V0BQ99437 205 aa10.46□□□□□ -0.74
SHOX-202ENST00000381575 FAM212BQ9NTI7 297 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms