RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 CXorf58Q96LI9 332 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 SSX3Q99909 188 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 GINS3Q9BRX5 216 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 MXRA5Q9NR99 2828 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 ACANP16112 2415 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 MYO9AB2RTY4 2548 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 SH2D7A6NKC9 451 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-202ENST00000381118 ATP6V1G1O75348 118 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 NMBP08949 121 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 RNASE2P10153 161 aaKnown RBP6.37□□□□□ -1.39
ERCC8-202ENST00000381118 EBI3Q14213 229 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 CYB5R2Q6BCY4 276 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 EIF5AL1Q6IS14 154 aaKnown RBP6.37□□□□□ -1.39
ERCC8-202ENST00000381118 TMEM182Q6ZP80 229 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-202ENST00000381118 BCL6BQ8N143 479 aaPredicted RBP6.37□□□□□ -1.39
ERCC8-202ENST00000381118 STPG2Q8N412 459 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 Q8N6K4 173 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 SCGB1C1Q8TD33 95 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 ABHD5Q8WTS1 349 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 UQCC1Q9NVA1 299 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 PLA2G2EQ9NZK7 142 aa6.37□□□□□ -1.39
ERCC8-202ENST00000381118 NOTCH2Q04721 2471 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 ZNF705EA8MWA4 302 aaPredicted RBP6.36□□□□□ -1.39
ERCC8-202ENST00000381118 H3BUX3 64 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 J3QLI3 93 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 LY86O95711 162 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 FBP1P09467 338 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 SPP1P10451 314 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 MAS1LP35410 378 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 FXYD3Q14802 87 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 MLANAQ16655 118 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 CLLU1Q5K131 121 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 Q8N9W7 124 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 RNF141Q8WVD5 230 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 TMEM147Q9BVK8 224 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
ERCC8-202ENST00000381118 ARV1Q9H2C2 271 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 FBXO7Q9Y3I1 522 aa6.36□□□□□ -1.39
ERCC8-202ENST00000381118 SONP18583 2426 aaKnown RBP6.36□□□□□ -1.39
ERCC8-202ENST00000381118 IGLC7A0M8Q6 106 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 PRSS46E5RG02 174 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 IGHV3-48P01763 117 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 PRH1P02810 166 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 FGF7P21781 194 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 FHITP49789 147 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 NDPQ00604 133 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 LRRC75BQ2VPJ9 315 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 P2RX4Q99571 388 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 FOXC2Q99958 501 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 RASL11BQ9BPW5 248 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 SLC25A33Q9BSK2 321 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 C1RLQ9NZP8 487 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 SEC11BP0C7V7 166 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 FAM157CP0CG43 387 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 OPRK1P41145 380 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 CX3CL1P78423 397 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 AKR1C1Q04828 323 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 ATP6V1FQ16864 119 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 BSXQ3C1V8 233 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 C2orf83Q53S99 150 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 ARSJQ5FYB0 599 aaPredicted RBP6.35□□□□□ -1.39
ERCC8-202ENST00000381118 IL17RELQ6ZVW7 336 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 NANPQ8TBE9 248 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 PIFOQ8TCI5 191 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 TAF15Q92804 592 aaKnown RBP eCLIP6.35□□□□□ -1.39
ERCC8-202ENST00000381118 CITED4Q96RK1 184 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 MEGF9Q9H1U4 602 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 TNFRSF19Q9NS68 423 aa6.35□□□□□ -1.39
ERCC8-202ENST00000381118 SULT1A2P50226 295 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 ELLP55199 621 aaPredicted RBP6.34□□□□□ -1.39
ERCC8-202ENST00000381118 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 NDUFA5Q16718 116 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 DEFB112Q30KQ8 113 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 TREML4Q6UXN2 200 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 ARPC1AQ92747 370 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 GNPNAT1Q96EK6 184 aaPredicted RBP6.34□□□□□ -1.39
ERCC8-202ENST00000381118 MISP3Q96FF7 219 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 HSPB9Q9BQS6 159 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 NPCDR1Q9BY65 106 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 IGHV7-81A0A0B4J1V7 117 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 A0A1B0GV50 99 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 INS-IGF2F8WCM5 200 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 DEFA4P12838 97 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 CAMLGP49069 296 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 SUB1P53999 127 aaKnown RBP eCLIP6.34□□□□□ -1.39
ERCC8-202ENST00000381118 VWC2Q2TAL6 325 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 C9orf152Q5JTZ5 239 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 BTNL8Q6UX41 500 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 ZNF562Q6V9R5 426 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 Q6ZRG5 221 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
ERCC8-202ENST00000381118 LFNGQ8NES3 379 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 OR2T6Q8NHC8 308 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 HRH4Q9H3N8 390 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 VSIRQ9H7M9 311 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 PARP11Q9NR21 331 aa6.34□□□□□ -1.39
ERCC8-202ENST00000381118 FGF16O43320 207 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms