RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 K7EIM0 57 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 HLA-DMAP28067 261 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 MFAP2P55001 183 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 TSPAN5P62079 268 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 LPCAT3Q6P1A2 487 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 Q6ZWC4 215 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 YIPF6Q96EC8 236 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 CHRDL1Q9BU40 450 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 FAM212BQ9NTI7 297 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-204ENST00000380749 TMEM14BQ9NUH8 114 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 TP53TG1Q9Y2A0 90 aa12.83□□□□□ -0.36
HMGN1-204ENST00000380749 A0A087WXM4 84 aa12.82□□□□□ -0.36
HMGN1-204ENST00000380749 UBE2CO00762 179 aa12.82□□□□□ -0.36
HMGN1-204ENST00000380749 BMI1P35226 326 aa12.82□□□□□ -0.36
HMGN1-204ENST00000380749 RELQ04864 619 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-204ENST00000380749 OR1P1Q8NH06 330 aa12.82□□□□□ -0.36
HMGN1-204ENST00000380749 SLC25A46Q96AG3 418 aa12.82□□□□□ -0.36
HMGN1-204ENST00000380749 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 CXorf65A6NEN9 183 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 C15orf62A8K5M9 175 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 F8W735 103 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-204ENST00000380749 K7EMT4 169 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 EIF4EP06730 217 aaKnown RBP12.81□□□□□ -0.36
HMGN1-204ENST00000380749 ADMP35318 185 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 WFDC3Q8IUB2 231 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 GPX8Q8TED1 209 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 DNAH6Q9C0G6 4158 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 IGHV3OR16-8A0A075B7F1 116 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 NUPL2O15504 423 aaKnown RBP12.81□□□□□ -0.36
HMGN1-204ENST00000380749 SPRY2O43597 315 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 ZNF207O43670 478 aaKnown RBP12.81□□□□□ -0.36
HMGN1-204ENST00000380749 TNFAIP8O95379 198 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 APOA1P02647 267 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 RCVRNP35243 200 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 PMS2P11Q13670 270 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 TBC1D26Q86UD7 250 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 LYSMD2Q8IV50 215 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 C6orf62Q9GZU0 229 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-204ENST00000380749 COMMD3Q9UBI1 195 aa12.81□□□□□ -0.36
HMGN1-204ENST00000380749 A0A0J9YWU9 116 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 NUPR2A6NF83 97 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 DBX1A6NMT0 343 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 TNFRSF9Q07011 255 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 LYG2Q86SG7 212 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 SNX29P2Q8IUI4 249 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 CMTM3Q96MX0 182 aa12.8□□□□□ -0.36
HMGN1-204ENST00000380749 DNAH10Q8IVF4 4471 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-204ENST00000380749 MFAP4P55083 255 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 GALNT14Q96FL9 552 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 SEC22AQ96IW7 307 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 TXN2Q99757 166 aa12.79□□□□□ -0.36
HMGN1-204ENST00000380749 VPS13DQ5THJ4 4388 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 YIF1AO95070 293 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 CTSGP08311 255 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-204ENST00000380749 UCP3P55916 312 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 MRGPRFQ96AM1 343 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
HMGN1-204ENST00000380749 AGRNO00468 2067 aa12.77□□□□□ -0.36
HMGN1-204ENST00000380749 I3L2K1 104 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 RPL35AP18077 110 aaKnown RBP12.77□□□□□ -0.37
HMGN1-204ENST00000380749 NCS1P62166 190 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 RNF183Q96D59 192 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 RNF2Q99496 336 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 GINS3Q9BRX5 216 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 RHPN1-AS1Q9BWJ2 59 aa12.77□□□□□ -0.37
HMGN1-204ENST00000380749 CHEK1O14757 476 aa12.76□□□□□ -0.37
HMGN1-204ENST00000380749 GNG7O60262 68 aa12.76□□□□□ -0.37
HMGN1-204ENST00000380749 MT-CO2P00403 227 aa12.76□□□□□ -0.37
HMGN1-204ENST00000380749 ATF4P18848 351 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 HSPE1P61604 102 aaKnown RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 ERHP84090 104 aaKnown RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
HMGN1-204ENST00000380749 NXF2Q9GZY0 626 aaKnown RBP12.76□□□□□ -0.37
HMGN1-204ENST00000380749 IGKV1-39P01597 117 aa12.75□□□□□ -0.37
HMGN1-204ENST00000380749 IGKV1D-39P04432 117 aa12.75□□□□□ -0.37
HMGN1-204ENST00000380749 VBP1P61758 197 aa12.75□□□□□ -0.37
HMGN1-204ENST00000380749 ZNF486Q96H40 463 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms