RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 MOB3AQ96BX8 217 aa3.48□□□□□ -1.85
C9orf72-203ENST00000380003 BET1LQ9NYM9 111 aa3.48□□□□□ -1.85
C9orf72-203ENST00000380003 EXTL2Q9UBQ6 330 aa3.48□□□□□ -1.85
C9orf72-203ENST00000380003 ETV7Q9Y603 341 aa3.48□□□□□ -1.85
C9orf72-203ENST00000380003 DNAH1Q9P2D7 4330 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 PKHD1P08F94 4074 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 A0A087WXM4 84 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SMIM31A0A1B0GVY4 71 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 CXorf65A6NEN9 183 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 C3orf84H3BNL1 204 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 K7EIM0 57 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TNFAIP8O95379 198 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 MT-CO2P00403 227 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 CTSGP08311 255 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TRAPPC2P0DI81 140 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TRAPPC2BP0DI82 140 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TAS2R31P59538 309 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 ERVK-16P61578 105 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 MEF2DQ14814 521 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 ARL6IP1Q15041 203 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 FAM106AQ4KMX7 169 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SLC16A13Q7RTY0 426 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 CMTM1Q8IZ96 169 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 Q8N402 240 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 MARCH1Q8TCQ1 289 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SPATA25Q9BR10 227 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 NDUFA4L2Q9NRX3 87 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 A0A0B4J293 547 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TGOLN2O43493 480 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SNAPC5O75971 98 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 DFFBO76075 338 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 LY6G6CO95867 125 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 IGKV1-5P01602 117 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SMIM18P0DKX4 95 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 AKR1C2P52895 323 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 DCTN2Q13561 401 aaKnown RBP3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TRIM16LQ309B1 348 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 ODF3L2Q3SX64 289 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 ZNF767PQ75MW2 155 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 H2BFWTQ7Z2G1 175 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 OR1L6Q8NGR2 347 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 GPX8Q8TED1 209 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 ZNF414Q96IQ9 312 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 SEC22AQ96IW7 307 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 TMEM68Q96MH6 324 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 PLEKHA2Q9HB19 425 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 CLEC5AQ9NY25 188 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 C21orf62Q9NYP8 219 aa3.47□□□□□ -1.85
C9orf72-203ENST00000380003 GPR31O00270 319 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 NUPL2O15504 423 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 CREBL2O60519 120 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 DHFRP00374 187 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 IFNA17P01571 189 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 GPHB5Q86YW7 130 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 RPP25LQ8N5L8 163 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 OR4A16Q8NH70 328 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 RHPN1-AS1Q9BWJ2 59 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 IFNA6P05013 189 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 PTBP1P26599 531 aaKnown RBP eCLIP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 LINC00322Q6ZN03 302 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 OR1L8Q8NGR8 309 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 LHFPL5Q8TAF8 219 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 SCRT1Q9BWW7 348 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 YTHDF1Q9BYJ9 559 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 C6orf62Q9GZU0 229 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 MIXL1Q9H2W2 232 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 VCX3AQ9NNX9 186 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 DAZ1Q9NQZ3 744 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 F11RQ9Y624 299 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 A0A1B0GU03 582 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 MRPS14O60783 128 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 SCGNO76038 276 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 SLC22A5O76082 557 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 CTSDP07339 412 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 OR5AC1P0C628 307 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 RORCP51449 518 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 SLC25A42Q86VD7 318 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 CLVS1Q8IUQ0 354 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 RNASE11Q8TAA1 199 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 ST8SIA2Q92186 375 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 LSM10Q969L4 123 aaKnown RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 CXorf58Q96LI9 332 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 FNDC4Q9H6D8 234 aaPredicted RBP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 MCUBQ9NWR8 336 aa3.46□□□□□ -1.86
C9orf72-203ENST00000380003 PUS1Q9Y606 427 aaKnown RBP eCLIP3.46□□□□□ -1.86
C9orf72-203ENST00000380003 TRBV7-1A0A0A6YYK4 115 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 LCE6AA0A183 80 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 LINC00854A0A1B0GVQ3 168 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 C15orf61A6NNL5 157 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 ST8SIA3O43173 380 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 GNG7O60262 68 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 APOA1P02647 267 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 SNRPCP09234 159 aaKnown RBP3.45□□□□□ -1.86
C9orf72-203ENST00000380003 TAS2R46P59540 309 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 IL18Q14116 193 aa3.45□□□□□ -1.86
C9orf72-203ENST00000380003 RNASE10Q5GAN6 216 aaKnown RBP3.45□□□□□ -1.86
C9orf72-203ENST00000380003 OR13C8Q8NGS7 320 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms