RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 FLYWCH2Q96CP2 140 aaKnown RBP12.72□□□□□ -0.37
BRF1-203ENST00000379937 SSBP3Q9BWW4 388 aaPredicted RBP12.72□□□□□ -0.37
BRF1-203ENST00000379937 ZNF98A6NK75 572 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 LY86O95711 162 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 SOD3P08294 240 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 RHEBQ15382 184 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 OR10D4PQ8NGN7 298 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 PRO1933Q9H354 126 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
BRF1-203ENST00000379937 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
BRF1-203ENST00000379937 MZT1Q08AG7 82 aa12.71□□□□□ -0.38
BRF1-203ENST00000379937 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.38
BRF1-203ENST00000379937 KLF2Q9Y5W3 355 aaPredicted RBP12.71□□□□□ -0.38
BRF1-203ENST00000379937 RAI1Q7Z5J4 1906 aaPredicted RBP12.71□□□□□ -0.38
BRF1-203ENST00000379937 GRIFINA4D1Z8 144 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 TMEM178BH3BS89 294 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 ACAA1P09110 424 aaPredicted RBP12.7□□□□□ -0.38
BRF1-203ENST00000379937 GAMTQ14353 236 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 RTL8BQ17RB0 113 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 ZNF561Q8N587 486 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 IGHV3-49A0A0A0MS15 119 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 H7BYZ3 331 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 HBE1P02100 147 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 NPPCP23582 126 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 RANP62826 216 aaKnown RBP12.7□□□□□ -0.38
BRF1-203ENST00000379937 SLC35E3Q7Z769 313 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 MRGPRGQ86SM5 289 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 FAM210BQ96KR6 192 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 IGLV3-9A0A075B6K5 115 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 IGKV1OR2-108A0A075B7D4 117 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 CRYBB3P26998 211 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 FUT9Q9Y231 359 aa12.7□□□□□ -0.38
BRF1-203ENST00000379937 S100A9P06702 114 aaKnown RBP12.69□□□□□ -0.38
BRF1-203ENST00000379937 C9orf152Q5JTZ5 239 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 OR1B1Q8NGR6 318 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 INSIG2Q9Y5U4 225 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 APOA2P02652 100 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 IL6RP08887 468 aaPredicted RBP12.69□□□□□ -0.38
BRF1-203ENST00000379937 RND2P52198 227 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 LFNGQ8NES3 379 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 IL22RA2Q969J5 263 aa12.69□□□□□ -0.38
BRF1-203ENST00000379937 HELZ2Q9BYK8 2649 aaKnown RBP12.69□□□□□ -0.38
BRF1-203ENST00000379937 MUC21A0A0G2JKD1 596 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 MUC21A0A140T8X8 626 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 VSTM5A8MXK1 200 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 LHBP01229 141 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 MT-ND4LP03901 98 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ELOBQ15370 118 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 BSXQ3C1V8 233 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 MUC21Q5SSG8 566 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ZNF355PQ9NSJ1 428 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 VAX2Q9UIW0 290 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ZNF320A2RRD8 509 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ZNF705GA8MUZ8 300 aaPredicted RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 YPEL1O60688 119 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 RBP4P02753 201 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 TMEM241Q24JQ0 296 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ZNF66Q6ZN08 573 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 YPEL2Q96QA6 119 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 ZNF430Q9H8G1 570 aaPredicted RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 RPUSD1Q9UJJ7 312 aaKnown RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 NIPBLQ6KC79 2804 aaeCLIP12.68□□□□□ -0.381e-6■■■■■ 35.4
BRF1-203ENST00000379937 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 S100A2P29034 98 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 SPCS3P61009 180 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 GNG5P63218 68 aa12.68□□□□□ -0.38
BRF1-203ENST00000379937 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
BRF1-203ENST00000379937 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
BRF1-203ENST00000379937 PPIAL4CA0A0B4J2A2 164 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 PPIAL4GP0DN37 164 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 MMDQ15546 238 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 ACOT6Q3I5F7 207 aaPredicted RBP12.67□□□□□ -0.38
BRF1-203ENST00000379937 FBLN7Q53RD9 439 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 TPPP3Q9BW30 176 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 YTHDF2Q9Y5A9 579 aaKnown RBP12.67□□□□□ -0.38
BRF1-203ENST00000379937 RPEQ96AT9 228 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 IGKV3-7A0A075B6H7 116 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 TRGC1P0CF51 173 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 HTD2P86397 168 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
BRF1-203ENST00000379937 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 TUBA4BQ9H853 241 aa12.67□□□□□ -0.38
BRF1-203ENST00000379937 DUXBA0A1W2PPF3 345 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 PMS2P5A8MQ11 134 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 IFNA1P01562 189 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 GNLYP22749 145 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 LOXP28300 417 aaPredicted RBP12.66□□□□□ -0.38
BRF1-203ENST00000379937 GALR1P47211 349 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 TEPPQ6URK8 271 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 C15orf54Q8N8G6 183 aa12.66□□□□□ -0.38
BRF1-203ENST00000379937 RNASE7Q9H1E1 156 aaKnown RBP12.66□□□□□ -0.38
BRF1-203ENST00000379937 CTXND1A0A1B0GTU2 59 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms