RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF880Q6PDB4 577 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 CSMD2Q7Z408 3487 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 C9JQL5 133 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 DLL1O00548 723 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 AZU1P20160 251 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 LCN2P80188 198 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 LCN15Q6UWW0 184 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 PTH2Q96A98 100 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 GTSF1LQ9H1H1 148 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 PIGMQ9H3S5 423 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 CALYQ9NYX4 217 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 HSPB7Q9UBY9 170 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 ARL16Q0P5N6 197 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 CATR1Q13166 79 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 FBLN7Q53RD9 439 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 LYPD2Q6UXB3 125 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 Q6ZS49 121 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 IGFBPL1Q8WX77 278 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 TAAR5O14804 337 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 MGST3O14880 152 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 APELAP0DMC3 54 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 VAMP3Q15836 100 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 RARRES2Q99969 163 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 SLC25A31Q9H0C2 315 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 LYRM2Q9NU23 88 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-201ENST00000379433 ZNF462Q96JM2 2506 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 IGSF10Q6WRI0 2623 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 TRGV10A0A0A0MS01 117 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 TRAV3A0A0B4J244 114 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 VENTXO95231 258 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 CCL20P78556 96 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 MST1LQ2TV78 715 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 C3orf36Q3SXR2 165 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 KHDC3LQ587J8 217 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 OR11H1Q8NG94 326 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 OR11H2Q8NH07 326 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 CISD1Q9NZ45 108 aaKnown RBP8.91□□□□□ -0.98
NEDD9-201ENST00000379433 MMP24Q9Y5R2 645 aa8.91□□□□□ -0.98
NEDD9-201ENST00000379433 K7N7A8 449 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 LYL1P12980 280 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 ADCYAP1P18509 176 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PAX9P55771 341 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 RPL31P62899 125 aaKnown RBP8.9□□□□□ -0.98
NEDD9-201ENST00000379433 ID3Q02535 119 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-201ENST00000379433 SLC35E3Q7Z769 313 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 LHX4Q969G2 390 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 SNX22Q96L94 193 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 P2RX4Q99571 388 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 QTRT1Q9BXR0 403 aaKnown RBP8.9□□□□□ -0.98
NEDD9-201ENST00000379433 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PPIAL4EA0A075B759 164 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 TRBV6-6A0A0A6YYG2 114 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 IGHV3-72A0A0B4J1Y9 119 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PPIAL4CA0A0B4J2A2 164 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 C17orf100A8MU93 164 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PPIAL4DF5H284 164 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 SFTA3P0C7M3 94 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PPIAL4FP0DN26 164 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 COL8A2P25067 703 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 LMO1P25800 156 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 RND3P61587 244 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 MORN2Q502X0 79 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 SCGB1C1Q8TD33 95 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 VSIRQ9H7M9 311 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 PSG8Q9UQ74 426 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 TLN2Q9Y4G6 2542 aa8.9□□□□□ -0.98
NEDD9-201ENST00000379433 A0A1W2PRD5 423 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 A0A1W2PRF3 423 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 A0A1W2PRM7 423 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 E7EQL1 145 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 RNASEK-C17orf49H0YIS7 233 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 TSPAN13O95857 204 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 PJVKQ0ZLH3 352 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 ZNF738Q8NE65 137 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 SDSLQ96GA7 329 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 SLC35E1Q96K37 410 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 RBKSQ9H477 322 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 UQCC1Q9NVA1 299 aa8.9□□□□□ -0.99
NEDD9-201ENST00000379433 SLC25A10Q9UBX3 287 aaPredicted RBP8.9□□□□□ -0.99
NEDD9-201ENST00000379433 A0A1B0GUS0 222 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 ZFP92A6NM28 416 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 LRRC30A6NM36 301 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 PROP1O75360 226 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 AMBPP02760 352 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 CLCC1Q96S66 551 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 SLC45A2Q9UMX9 530 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 IGLV3-9A0A075B6K5 115 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 C15orf65H3BRN8 121 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 RAB29O14966 203 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 SULT1A2P50226 295 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 ZNF266Q14584 549 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 S1PR3Q99500 378 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms