RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TET2Q6N021 2002 aaPredicted RBP19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 A0A1B0GW64 132 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 A6NDX4 124 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 BTBD17A6NE02 478 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 TEX22C9J3V5 150 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 CX3CL1P78423 397 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 SLC25A24Q6NUK1 477 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 C5orf56Q8N8D9 126 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 SCARB1Q8WTV0 552 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 PARD6GQ9BYG4 376 aaPredicted RBP19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 ARV1Q9H2C2 271 aa19.51■□□□□ 0.71
ECHDC3-201ENST00000379215 CFDP00746 253 aaPredicted RBP19.5■□□□□ 0.71
ECHDC3-201ENST00000379215 HNF1AP20823 631 aa19.5■□□□□ 0.71
ECHDC3-201ENST00000379215 ABHD5Q8WTS1 349 aa19.5■□□□□ 0.71
ECHDC3-201ENST00000379215 UQCC1Q9NVA1 299 aa19.5■□□□□ 0.71
ECHDC3-201ENST00000379215 SOX21Q9Y651 276 aaPredicted RBP19.5■□□□□ 0.71
ECHDC3-201ENST00000379215 TNCP24821 2201 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 DLK1P80370 383 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 KRTAP1-1Q07627 177 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 OR1L6Q8NGR2 347 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 SCGB1C1Q8TD33 95 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 RNASEH2CQ8TDP1 164 aaKnown RBP19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 TMEM170AQ8WVE7 144 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 SSMEM1Q8WWF3 244 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 GINS3Q9BRX5 216 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 ABCA1O95477 2261 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 CSMD1Q96PZ7 3565 aa19.49■□□□□ 0.71
ECHDC3-201ENST00000379215 FNDC10F2Z333 226 aa19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 CORTO00230 105 aa19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 VWC2Q2TAL6 325 aa19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 SPNS3Q6ZMD2 512 aa19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 BCL6BQ8N143 479 aaPredicted RBP19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 GNPNAT1Q96EK6 184 aaPredicted RBP19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 PRDM13Q9H4Q3 707 aa19.48■□□□□ 0.71
ECHDC3-201ENST00000379215 IGHV7-81A0A0B4J1V7 117 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 PRSS46E5RG02 174 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 TUSC1Q2TAM9 212 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 TMEM219Q86XT9 240 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 OR1P1Q8NH06 330 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 SRP14P37108 136 aaKnown RBP19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 IER3P46695 156 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 SCGB2A2Q13296 93 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 ALKAL2Q6UX46 152 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 P2RX4Q99571 388 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 YAE1D1Q9NRH1 226 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 TMEM160Q9NX00 188 aa19.47■□□□□ 0.71
ECHDC3-201ENST00000379215 MDFIC2A0A1B0GVS7 189 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 CYB5BO43169 146 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 SEC11BP0C7V7 166 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 AREGP15514 252 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 Q6YL49 198 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 CACNG8Q8WXS5 425 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 TMEM68Q96MH6 324 aa19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 F11RQ9Y624 299 aaKnown RBP19.46■□□□□ 0.71
ECHDC3-201ENST00000379215 GPX4P36969 197 aaPredicted RBP19.45■□□□□ 0.7
ECHDC3-201ENST00000379215 RAB14P61106 215 aa19.45■□□□□ 0.7
ECHDC3-201ENST00000379215 LY6EQ16553 131 aa19.45■□□□□ 0.7
ECHDC3-201ENST00000379215 PVRIGQ6DKI7 326 aa19.45■□□□□ 0.7
ECHDC3-201ENST00000379215 C22orf15Q8WYQ4 148 aa19.45■□□□□ 0.7
ECHDC3-201ENST00000379215 UBE2L5PA0A1B0GUS4 154 aa19.44■□□□□ 0.7
ECHDC3-201ENST00000379215 NPIPB5A8MRT5 1133 aa19.44■□□□□ 0.7
ECHDC3-201ENST00000379215 ETFRF1Q6IPR1 90 aa19.44■□□□□ 0.7
ECHDC3-201ENST00000379215 HSD17B11Q8NBQ5 300 aa19.44■□□□□ 0.7
ECHDC3-201ENST00000379215 WDR61Q9GZS3 305 aaKnown RBP19.44■□□□□ 0.7
ECHDC3-201ENST00000379215 MPDU1O75352 247 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 SPP1P10451 314 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 SGMS2Q8NHU3 365 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 LRRC20Q8TCA0 184 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 IGHV4-59P01825 116 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 REG1AP05451 166 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 CRYGCP07315 174 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 CTRB1P17538 263 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 NDPQ00604 133 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 CTRB2Q6GPI1 263 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 TMED6Q8WW62 240 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 SLC25A32Q9H2D1 315 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 VPREB3Q9UKI3 123 aa19.43■□□□□ 0.7
ECHDC3-201ENST00000379215 RPS10-NUDT3A0A1W2PQS6 291 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 DEFA4P12838 97 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 ATP6V0CP27449 155 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 CD69Q07108 199 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 TTC9CQ8N5M4 171 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 TAF15Q92804 592 aaKnown RBP eCLIP19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 HSPB9Q9BQS6 159 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 PSMG3Q9BT73 122 aaPredicted RBP19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 NPVFQ9HCQ7 196 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 PARP11Q9NR21 331 aa19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 FLNAP21333 2647 aaKnown RBP19.42■□□□□ 0.7
ECHDC3-201ENST00000379215 SMCO3A2RU48 225 aa19.41■□□□□ 0.7
ECHDC3-201ENST00000379215 FAM103A1Q9BTL3 118 aaKnown RBP19.41■□□□□ 0.7
ECHDC3-201ENST00000379215 TIMM9Q9Y5J7 89 aa19.41■□□□□ 0.7
ECHDC3-201ENST00000379215 ZANQ9Y493 2812 aa19.41■□□□□ 0.7
ECHDC3-201ENST00000379215 FBXO24O75426 580 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 APELAP0DMC3 54 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 OPRK1P41145 380 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 TMEM86BQ8N661 226 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 RNF141Q8WVD5 230 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 SLC35E1Q96K37 410 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 WDR83OSQ9Y284 106 aa19.4■□□□□ 0.7
ECHDC3-201ENST00000379215 AKAP9Q99996 3911 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms