RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CIB3Q96Q77 187 aaPredicted RBP15.78■□□□□ 0.12
SSU72-204ENST00000378726 MRPL20Q9BYC9 149 aaKnown RBP15.78■□□□□ 0.12
SSU72-204ENST00000378726 PRO1933Q9H354 126 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 SRD5A3Q9H8P0 318 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 PITPNC1Q9UKF7 332 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 TIMM9Q9Y5J7 89 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 KBTBD11O94819 623 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 RPS16P62249 146 aaKnown RBP15.78■□□□□ 0.12
SSU72-204ENST00000378726 RPL23P62829 140 aaKnown RBP15.78■□□□□ 0.12
SSU72-204ENST00000378726 CENPVQ7Z7K6 275 aaPredicted RBP15.78■□□□□ 0.12
SSU72-204ENST00000378726 OR5R1Q8NH85 324 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 ZFYVE26Q68DK2 2539 aa15.78■□□□□ 0.12
SSU72-204ENST00000378726 DIAPH2-AS1Q14236 149 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 SSX2Q16385 188 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 BSXQ3C1V8 233 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 OR4A47Q6IF82 309 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 C8orf46Q8TAG6 207 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 ST6GALNAC6Q969X2 333 aa15.77■□□□□ 0.12
SSU72-204ENST00000378726 PATZ1Q9HBE1 687 aaKnown RBP15.77■□□□□ 0.12
SSU72-204ENST00000378726 PAX1P15863 534 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 DLX1P56177 255 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 SPCS3P61009 180 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 GNB2P62879 340 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 PYGO2Q9BRQ0 406 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 C2orf88Q9BSF0 95 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 SMCO3A2RU48 225 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 SRRM4A7MD48 611 aaKnown RBP15.76■□□□□ 0.11
SSU72-204ENST00000378726 CLEC12BQ2HXU8 276 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 OR5AN1Q8NGI8 311 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 OR52E5Q8NH55 327 aa15.76■□□□□ 0.11
SSU72-204ENST00000378726 APOA2P02652 100 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 GPR6P46095 362 aaPredicted RBP15.75■□□□□ 0.11
SSU72-204ENST00000378726 PSMB3P49720 205 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 EFNA4P52798 201 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 POU2AF1Q16633 256 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 TMEM183AQ8IXX5 376 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 LY6G5BQ8NDX9 201 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 OR51G1Q8NGK1 321 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 OR10G9Q8NGN4 311 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 OR10G7Q8NGN6 311 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 ELOVL1Q9BW60 279 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 PARLQ9H300 379 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 PMS2P5A8MQ11 134 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 H0YJW9 148 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 LIPFP07098 398 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 FGF7P21781 194 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 GALR1P47211 349 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 PRB3Q04118 309 aaPredicted RBP15.75■□□□□ 0.11
SSU72-204ENST00000378726 FAM71F2Q6NXP2 309 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 NABP2Q9BQ15 211 aa15.75■□□□□ 0.11
SSU72-204ENST00000378726 IGHV2-26A0A0B4J1V2 119 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 CTXND1A0A1B0GTU2 59 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 C22orf46C9J442 243 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 ZNF137PP52743 207 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 PRRX1P54821 245 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 OR4F5Q8NH21 305 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 OR4F4Q96R69 305 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 TMEM147Q9BVK8 224 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 FLNCQ14315 2725 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 C15orf61A6NNL5 157 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 H7BYZ3 331 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 AMBPP02760 352 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 FFAR4Q5NUL3 377 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 TGIF2LXQ8IUE1 241 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 TNFRSF14Q92956 283 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 PCGF1Q9BSM1 259 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 SSBP3Q9BWW4 388 aaPredicted RBP15.74■□□□□ 0.11
SSU72-204ENST00000378726 ONECUT1Q9UBC0 465 aa15.74■□□□□ 0.11
SSU72-204ENST00000378726 TMEM250H0YL14 139 aa15.73■□□□□ 0.11
SSU72-204ENST00000378726 RBP4P02753 201 aa15.73■□□□□ 0.11
SSU72-204ENST00000378726 PDLIM3Q53GG5 364 aaPredicted RBP15.73■□□□□ 0.11
SSU72-204ENST00000378726 OR1P1Q8NH06 330 aa15.73■□□□□ 0.11
SSU72-204ENST00000378726 OSR1Q8TAX0 266 aaPredicted RBP15.73■□□□□ 0.11
SSU72-204ENST00000378726 FLYWCH2Q96CP2 140 aaKnown RBP15.73■□□□□ 0.11
SSU72-204ENST00000378726 IL6RP08887 468 aaPredicted RBP15.72■□□□□ 0.11
SSU72-204ENST00000378726 DEFA4P12838 97 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 IL3RAP26951 378 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 ATP6V1FQ16864 119 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 ZNF843Q8N446 348 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 CLEC7AQ9BXN2 247 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 HEYLQ9NQ87 328 aaPredicted RBP15.72■□□□□ 0.11
SSU72-204ENST00000378726 TMEM14BQ9NUH8 114 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 TCF19Q9Y242 345 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 COL12A1Q99715 3063 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 LOC105371242A0A075B767 164 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 IGLV1-47P01700 117 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 RAB4BP61018 213 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 HSPE1P61604 102 aaKnown RBP15.72■□□□□ 0.11
SSU72-204ENST00000378726 OR10P1Q8NGE3 313 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 RAB24Q969Q5 203 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 OR5B12Q96R08 314 aa15.72■□□□□ 0.11
SSU72-204ENST00000378726 FOXA2Q9Y261 457 aaPredicted RBP15.72■□□□□ 0.11
SSU72-204ENST00000378726 XKRY2A2RUG3 117 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 UPK2O00526 184 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 PAGE4O60829 102 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 VDAC2P45880 294 aaPredicted RBP15.71■□□□□ 0.11
SSU72-204ENST00000378726 ARF6P62330 175 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 JOSD1Q15040 202 aaPredicted RBP15.71■□□□□ 0.11
SSU72-204ENST00000378726 TMEM177Q53S58 311 aa15.71■□□□□ 0.11
SSU72-204ENST00000378726 MISP3Q96FF7 219 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms