RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MRPL41Q8IXM3 137 aaKnown RBP14.51□□□□□ -0.09
SSU72-203ENST00000378725 OR2C3Q8N628 320 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 COQ8AQ8NI60 647 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 ENKURQ8TC29 256 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 P2RX4Q99571 388 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 PDCD10Q9BUL8 212 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 CACFD1Q9UGQ2 172 aa14.51□□□□□ -0.09
SSU72-203ENST00000378725 IGLV11-55A0A075B6I3 123 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 CCL24O00175 119 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 IFNA17P01571 189 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 DEFA4P12838 97 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 WFDC9Q8NEX5 89 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 MITD1Q8WV92 249 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 OR5B12Q96R08 314 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 PLEKHA3Q9HB20 300 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 DMRT1Q9Y5R6 373 aa14.5□□□□□ -0.09
SSU72-203ENST00000378725 F11RQ9Y624 299 aaKnown RBP14.5□□□□□ -0.09
SSU72-203ENST00000378725 PITX3O75364 302 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 OR2J3O76001 311 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 IGHV3-11P01762 117 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 ERHP84090 104 aaKnown RBP14.49□□□□□ -0.09
SSU72-203ENST00000378725 ATP5G2Q06055 141 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 DEFB136Q30KP8 78 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 ZNF343Q6P1L6 599 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 ZNF114Q8NC26 417 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 OR11H1Q8NG94 326 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 OR52B4Q8NGK2 314 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 FBXL7Q9UJT9 491 aa14.49□□□□□ -0.09
SSU72-203ENST00000378725 NDUFB8O95169 186 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 PF4P02776 101 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 IL5P05113 134 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 HOXB5P09067 269 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 MFAP2P55001 183 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 DEFA5Q01523 94 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 FHL3Q13643 280 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 C15orf32Q32M92 178 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 SPINK9Q5DT21 86 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 GGNBP1Q5YKI7 109 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 OR1L6Q8NGR2 347 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 OR1N2Q8NGR9 330 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 OR1P1Q8NH06 330 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 ZNF431Q8TF32 576 aaPredicted RBP14.48□□□□□ -0.09
SSU72-203ENST00000378725 DUX3Q96PT4 197 aa14.48□□□□□ -0.09
SSU72-203ENST00000378725 CYB5BO43169 146 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 HSPB1P04792 205 aaKnown RBP14.47□□□□□ -0.09
SSU72-203ENST00000378725 PLET1Q6UQ28 207 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 SEC22CQ9BRL7 303 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 MARVELD1Q9BSK0 173 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 PALMDQ9NP74 551 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 THYN1Q9P016 225 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 HSPB7Q9UBY9 170 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 TRRAPQ9Y4A5 3859 aa14.47□□□□□ -0.09
SSU72-203ENST00000378725 ADAP1O75689 374 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 TNFRSF9Q07011 255 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 ZNF616Q08AN1 781 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 PVRIGQ6DKI7 326 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 SLC25A24Q6NUK1 477 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 ENY2Q9NPA8 101 aa14.46□□□□□ -0.09
SSU72-203ENST00000378725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.45□□□□□ -0.1
SSU72-203ENST00000378725 HOXA1P49639 335 aaPredicted RBP14.45□□□□□ -0.1
SSU72-203ENST00000378725 BSXQ3C1V8 233 aa14.45□□□□□ -0.1
SSU72-203ENST00000378725 OR1S1Q8NH92 325 aa14.45□□□□□ -0.1
SSU72-203ENST00000378725 DPF1Q92782 380 aa14.45□□□□□ -0.1
SSU72-203ENST00000378725 RANGRFQ9HD47 186 aaPredicted RBP14.45□□□□□ -0.1
SSU72-203ENST00000378725 PEF1Q9UBV8 284 aaKnown RBP14.45□□□□□ -0.1
SSU72-203ENST00000378725 IGHV4OR15-8A0A075B7B6 117 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 A0A087WW49 117 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 FAM90A26D6RGX4 464 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 INMT-MINDY4F8WBC2 141 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 LINC01619G3V211 115 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 IFNA21P01568 189 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 OR8U8P0C7N1 319 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 SNCAP37840 140 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 EXOSC2Q13868 293 aaKnown RBP14.44□□□□□ -0.1
SSU72-203ENST00000378725 FAM209BQ5JX69 171 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 C12orf45Q8N5I9 185 aaPredicted RBP14.44□□□□□ -0.1
SSU72-203ENST00000378725 VN1R17PQ8TDU5 208 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 CXorf58Q96LI9 332 aa14.44□□□□□ -0.1
SSU72-203ENST00000378725 TRBV7-1A0A0A6YYK4 115 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 ANKRD34BA5PLL1 514 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 CEBPZOSA8MTT3 80 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 MPTX1A8MV57 137 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 RNASE2P10153 161 aaKnown RBP14.43□□□□□ -0.1
SSU72-203ENST00000378725 SPNP16150 400 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 SUB1P53999 127 aaKnown RBP eCLIP14.43□□□□□ -0.1
SSU72-203ENST00000378725 EEF1AKMT3Q96AZ1 226 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 RBKSQ9H477 322 aa14.43□□□□□ -0.1
SSU72-203ENST00000378725 MFSD2BA6NFX1 497 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 K7EIM0 57 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 PRAF2O60831 178 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 NXPH3O95157 252 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 PTTG1O95997 202 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 TRBV12-3P01733 135 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 HTR2BP41595 481 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 CCDC140Q96MF4 163 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 HIPK2Q9H2X6 1198 aa14.42□□□□□ -0.1
SSU72-203ENST00000378725 GPN1Q9HCN4 374 aaPredicted RBP14.42□□□□□ -0.1
SSU72-203ENST00000378725 HEYLQ9NQ87 328 aaPredicted RBP14.42□□□□□ -0.1
SSU72-203ENST00000378725 SNRPGP15A8MWD9 76 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms