RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SYNGR3O43761 229 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 Q5PR19 223 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 ZNF414Q96IQ9 312 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 FOXD3Q9UJU5 478 aaPredicted RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 APOHP02749 345 aaPredicted RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 GLRX5Q86SX6 157 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 AICDAQ9GZX7 198 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 ARID1AO14497 2285 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 LYNX1G3V0Z9 82 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 TGFBR3LH3BV60 316 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 LYNX1P0DP58 116 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 PTGDSP41222 190 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 TCF24Q7RTU0 167 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 C19orf24Q9BVV8 132 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 SIPA1L1O43166 1804 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 FOXI3A8MTJ6 420 aaPredicted RBP10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 LIPFP07098 398 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 COX5BP10606 129 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 FAM166AQ6J272 317 aa10.12□□□□□ -0.79
PCDHA9-201ENST00000378122 CHD5Q8TDI0 1954 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 MTURNQ8N3F0 131 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 PGPEP1Q9NXJ5 209 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 ZNRF1Q8ND25 227 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 YLPM1P49750 1951 aaKnown RBP10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 ZCCHC24Q8N2G6 241 aaKnown RBP10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 DNASE2BQ8WZ79 361 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 FAM131CQ96AQ9 280 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 LURAP1LQ8IV03 231 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 ELOVL5Q9NYP7 299 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 A0A1W2PS18 150 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 A6NNC1 897 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 B9A039 149 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 TRGV3P03979 118 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 GPX1P07203 203 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 RPL23P62829 140 aaKnown RBP10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 ACP7Q6ZNF0 438 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
PCDHA9-201ENST00000378122 DOCK10Q96BY6 2186 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 IGFBP3P17936 291 aaPredicted RBP10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 CACNA1BQ00975 2339 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 A0A1B0GTI1 187 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 COLCA1Q6ZS62 124 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 TMEM170AQ8WVE7 144 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 SERF1AO75920 110 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 PRSS2P07478 247 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 RFPL3SP0C7P2 107 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 CLDN16Q9Y5I7 305 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 LY6G6FQ5SQ64 297 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 MIR17HGQ75NE6 70 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 VGLL1Q99990 258 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 LINC00114Q6XXX2 140 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 Q96MF0 132 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 DUX3Q96PT4 197 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 CRIM1Q9NZV1 1036 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 SAP30O75446 220 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
PCDHA9-201ENST00000378122 BRCA1P38398 1863 aaKnown RBP10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 TNFSF10P50591 281 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 SPCS1Q9Y6A9 102 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 IZUMO1RA6ND01 250 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 NPIPB6E9PJ23 425 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 WFDC1Q9HC57 220 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 NEUROG3Q9Y4Z2 214 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 CELA3AP09093 270 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 SMAGPQ0VAQ4 97 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 RIPPLY2Q5TAB7 128 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 TMEM186Q96B77 213 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 LINC01587Q99440 93 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 LINC00470Q9BZP3 86 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 SOX21Q9Y651 276 aaPredicted RBP10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 F8VVB4 439 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 F8VWA3 439 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 SAMD13Q5VXD3 122 aa10.09□□□□□ -0.79
PCDHA9-201ENST00000378122 RALGAPA1Q6GYQ0 2036 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 PEX7O00628 323 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 NPFFO15130 113 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 FXYD7P58549 80 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 CHCHD2Q9Y6H1 151 aaPredicted RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A0G2JMM0 328 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A1W2PPB8 328 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 A0A1W2PRS3 328 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 KIR3DP1A8MWS1 328 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 C12orf77C9JDV5 145 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 ZNF525Q8N782 197 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 OR9G1Q8NH87 305 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
PCDHA9-201ENST00000378122 SAA1P0DJI8 122 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms