RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TFF3Q07654 80 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 CYB5R2Q6BCY4 276 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 VKORC1L1Q8N0U8 176 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 WFIKKN1Q96NZ8 548 aa7.07□□□□□ -1.28
VPS36-201ENST00000378060 FOXD3Q9UJU5 478 aaPredicted RBP7.07□□□□□ -1.28
VPS36-201ENST00000378060 SPTBN4Q9H254 2564 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 ACACAQ13085 2346 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 IGHV3-72A0A0B4J1Y9 119 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 RBFOX2O43251 390 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS36-201ENST00000378060 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 TIMM23BQ5SRD1 257 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 TMEM144Q7Z5S9 345 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 TMEM208Q9BTX3 173 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 IQCF6A8MYZ5 107 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 CGAP01215 116 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 ID1P41134 155 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 GPR6P46095 362 aaPredicted RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 PLP1P60201 277 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 TBR1Q16650 682 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 RSPO4Q2I0M5 234 aaPredicted RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 TBL2Q9Y4P3 447 aaKnown RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 E9PQ18 207 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 WNT9BO14905 357 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 NKX2-8O15522 239 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 MGPP08493 103 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 ZNF883P0CG24 379 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 FCGR2BP31994 310 aaPredicted RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 ATP5G3P48201 142 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 CCL20P78556 96 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 PEAR1Q5VY43 1037 aaPredicted RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 DPF1Q92782 380 aa7.06□□□□□ -1.28
VPS36-201ENST00000378060 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
VPS36-201ENST00000378060 BOD1L1Q8NFC6 3051 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 A0A1W2PS18 150 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 OR4C46A6NHA9 309 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 FAM106CPP0CH98 169 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 CEACAM1P13688 526 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 CRYGSP22914 178 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 PSG7Q13046 419 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 ZNRF1Q8ND25 227 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 FGF11Q92914 225 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 PRDM13Q9H4Q3 707 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 A0A1B0GW15 77 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 SLC17A3O00476 420 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 CFPP27918 469 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 ECSCRQ19T08 205 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 PLA2G2CQ5R387 149 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 RNASEH2CQ8TDP1 164 aaKnown RBP7.05□□□□□ -1.28
VPS36-201ENST00000378060 LEAP2Q969E1 77 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 LY6G6EA0A0G2JKS1 128 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 PEX7O00628 323 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 GOLT1AQ6ZVE7 132 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 OR13A1Q8NGR1 328 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 METTL26Q96S19 204 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 CLEC7AQ9BXN2 247 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 WFDC1Q9HC57 220 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 TMEM106BQ9NUM4 274 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 PEF1Q9UBV8 284 aaKnown RBP7.05□□□□□ -1.28
VPS36-201ENST00000378060 WDR83OSQ9Y284 106 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 U3KQA8 63 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 NBASA2RRP1 2371 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 ROS1P08922 2347 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 WNK2Q9Y3S1 2297 aa7.05□□□□□ -1.28
VPS36-201ENST00000378060 KBTBD11-OT1A0A1B0GTJ5 212 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 FAM90A9PA6NNJ1 464 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 M0R3E3 92 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 YPEL1O60688 119 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 CECR9P0C854 216 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 IGFBP2P18065 325 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 MEF2CQ06413 473 aaPredicted RBP7.04□□□□□ -1.28
VPS36-201ENST00000378060 Q6AWC8 147 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 LINC00305Q7Z4B0 112 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 YPEL2Q96QA6 119 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 AKIRIN1Q9H9L7 192 aaPredicted RBP7.04□□□□□ -1.28
VPS36-201ENST00000378060 OSTCQ9NRP0 149 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ZZEF1O43149 2961 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 UQCRFS1P47985 274 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ZNF841Q6ZN19 808 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ZNF497Q6ZNH5 498 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 RABAC1Q9UI14 185 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 MPDZO75970 2070 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 IZUMO1RA6ND01 250 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 LYL1P12980 280 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 GCSHP23434 173 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 C2orf83Q53S99 150 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 ZNF324BQ6AW86 544 aaPredicted RBP7.04□□□□□ -1.28
VPS36-201ENST00000378060 PLPPR1Q8TBJ4 325 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 SIGLEC12Q96PQ1 595 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 HILPDAQ9Y5L2 63 aa7.04□□□□□ -1.28
VPS36-201ENST00000378060 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms