RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GFRALQ6UXV0 394 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 SRSF12Q8WXF0 261 aaKnown RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 FNDC10F2Z333 226 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 MORN2Q502X0 79 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 Q6P435 159 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 NPIPB3Q92617 1050 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 AP5S1Q9NUS5 200 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 UFC1Q9Y3C8 167 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 COL4A6Q14031 1691 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 GDF9O60383 454 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 HIST1H1AQ02539 215 aaPredicted RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 PSG7Q13046 419 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 LPAR2Q9HBW0 351 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 LOC102724200A0A096LPH7 203 aaPredicted RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 A0A0G2JRQ6 117 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 FBLL1A6NHQ2 334 aaKnown RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 PATE3B3GLJ2 98 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 KLF7O75840 302 aaPredicted RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 PAX9P55771 341 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 GAGE1Q13065 139 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 MGST2Q99735 147 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 MYO7AQ13402 2215 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 OBSL1O75147 1896 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 SS18L1O75177 396 aaPredicted RBP7.32□□□□□ -1.24
PCDH9-202ENST00000377865 PLAUP00749 431 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 PRCDQ00LT1 54 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 TMEM256Q8N2U0 113 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 TSKUQ8WUA8 353 aa7.32□□□□□ -1.24
PCDH9-202ENST00000377865 FAM181BA6NEQ2 426 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 RPL13AP40429 203 aaKnown RBP7.31□□□□□ -1.24
PCDH9-202ENST00000377865 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 LYPD6Q86Y78 171 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF581Q9P0T4 197 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 DENND4CQ5VZ89 1909 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 TDRD6O60522 2096 aaKnown RBP7.31□□□□□ -1.24
PCDH9-202ENST00000377865 HIGD1CA8MV81 97 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 NUDT3O95989 172 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 MTURNQ8N3F0 131 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 OR9G1Q8NH87 305 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 LEAP2Q969E1 77 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 GPR82Q96P67 336 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 PGPEP1LA6NFU8 196 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 CELA3AP09093 270 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 FREM3P0C091 2139 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 NBEAP1P0C6P0 100 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 GPR183P32249 361 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 C1RLQ9NZP8 487 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF257Q9Y2Q1 563 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 GCSAMLQ5JQS6 135 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 WDR82Q6UXN9 313 aa7.31□□□□□ -1.24
PCDH9-202ENST00000377865 A0A1B0GUT8 65 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 CD3EP07766 207 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 IGHV1-2P23083 117 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 MEF2CQ06413 473 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF524Q96C55 264 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 TMEM208Q9BTX3 173 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 APOHP02749 345 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-202ENST00000377865 CX3CL1P78423 397 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 MMDQ15546 238 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 TRIP6Q15654 476 aaKnown RBP7.3□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF726P1Q15940 193 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 SCGB1D4Q6XE38 83 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 ZNF414Q96IQ9 312 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 LIME1Q9H400 295 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 SAA2-SAA4A0A096LPE2 208 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 SAA2P0DJI9 122 aaPredicted RBP7.3□□□□□ -1.24
PCDH9-202ENST00000377865 B3GALT5-AS1P59052 145 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 KRTCAP3Q53RY4 240 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 HCP5Q6MZN7 132 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 CCDC144NLQ6NUI1 221 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 DEPPQ9NTK1 212 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 TMSB15BA0A087X1C1 80 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 C16orf97H3BN30 126 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 SLC25A17O43808 307 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 OR4X2Q8NGF9 303 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 IGHV3-21A0A0B4J1V1 117 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 CECR9P0C854 216 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 GOLT1AQ6ZVE7 132 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 NEU1Q99519 415 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 SNHG12Q9BXW3 62 aa7.3□□□□□ -1.24
PCDH9-202ENST00000377865 MRPS16Q9Y3D3 137 aaKnown RBP7.3□□□□□ -1.24
PCDH9-202ENST00000377865 IGHV2OR16-5A0A0B4J2B6 119 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 TCRBV4S1A1TA0A5B7 111 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 MMP23AO75900 390 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 SFTPCP11686 197 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 GPR6P46095 362 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-202ENST00000377865 TCTAP57738 103 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 SEC11AP67812 179 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 C2orf83Q53S99 150 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 DERL1Q9BUN8 251 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 AKIRIN1Q9H9L7 192 aaPredicted RBP7.29□□□□□ -1.24
PCDH9-202ENST00000377865 EPDR1Q9UM22 224 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 FAM157AC9JC47 383 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 GCSHP23434 173 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 GLRXP35754 106 aa7.29□□□□□ -1.24
PCDH9-202ENST00000377865 CD69Q07108 199 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms