RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 C1QL1O75973 258 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 PSG4Q00888 419 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 CYP2G1PQ6ZSU1 146 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 GPR146Q96CH1 333 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 NAV3Q8IVL0 2385 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 ZG16O60844 167 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 SCTP09683 121 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 APOBEC3AP31941 199 aaPredicted RBP9.06□□□□□ -0.96
RTN3-206ENST00000377819 TCTEX1D4Q5JR98 221 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 DPM2O94777 84 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 CBLN1P23435 193 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 PCOLCEQ15113 449 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 DLL3Q9NYJ7 618 aa9.06□□□□□ -0.96
RTN3-206ENST00000377819 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
RTN3-206ENST00000377819 CD5LO43866 347 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 PGLYRP1O75594 196 aaPredicted RBP9.05□□□□□ -0.96
RTN3-206ENST00000377819 IGLV3-27P01718 113 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 CXCL3P19876 107 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 TMEM258P61165 79 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
RTN3-206ENST00000377819 MZB1Q8WU39 189 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 OR5P3Q8WZ94 311 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 FOXA2Q9Y261 457 aaPredicted RBP9.05□□□□□ -0.96
RTN3-206ENST00000377819 MYH6P13533 1939 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 TRAV8-1A0A0A6YYK1 113 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 KLF4O43474 513 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 CT62P0C5K7 136 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 KLK2P20151 261 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 RASL10AQ92737 203 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 MUC21A0A0G2JKD1 596 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 MUC21A0A140T8X8 626 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 TCRBV4S1A1TA0A5B7 111 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 NCR2O95944 276 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
RTN3-206ENST00000377819 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 VDAC2P45880 294 aaPredicted RBP9.05□□□□□ -0.96
RTN3-206ENST00000377819 TIMM23BQ5SRD1 257 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 Q6ZNB5 142 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 HMGCLL1Q8TB92 370 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 COQ2Q96H96 371 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
RTN3-206ENST00000377819 CYB5R2Q6BCY4 276 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 OR52E5Q8NH55 327 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 PRR19A6NJB7 356 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
RTN3-206ENST00000377819 LHFPL4Q7Z7J7 247 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 APCDD1LQ8NCL9 501 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 CRYGNQ8WXF5 182 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 CGB3P0DN86 165 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 RND3P61587 244 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 CT83Q5H943 113 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 COX5BP10606 129 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 BHLHA9Q7RTU4 235 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 LINC01555Q8NAE3 123 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 SMIM8Q96KF7 97 aa9.04□□□□□ -0.96
RTN3-206ENST00000377819 MED13LQ71F56 2210 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 NUP214P35658 2090 aaPredicted RBP9.03□□□□□ -0.96
RTN3-206ENST00000377819 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
RTN3-206ENST00000377819 C19orf48Q6RUI8 117 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 ZIC4Q8N9L1 334 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 MS4A3Q96HJ5 214 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
RTN3-206ENST00000377819 DMRT1Q9Y5R6 373 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 MYH1P12882 1939 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 CLPSL1A2RUU4 121 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 GTF3AQ92664 365 aaKnown RBP9.03□□□□□ -0.96
RTN3-206ENST00000377819 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 GDF15Q99988 308 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 BAZ2AQ9UIF9 1905 aaKnown RBP9.03□□□□□ -0.96
RTN3-206ENST00000377819 MYH7BA7E2Y1 1941 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 IGHV5-10-1A0A0J9YXX1 117 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 FDCSPQ8NFU4 85 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
RTN3-206ENST00000377819 RIPPLY2Q5TAB7 128 aa9.02□□□□□ -0.96
RTN3-206ENST00000377819 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.96
RTN3-206ENST00000377819 V9GYH0 126 aa9.02□□□□□ -0.96
RTN3-206ENST00000377819 NPIPB13A6NJU9 1138 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 NPIPB5A8MRT5 1133 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 CXCL10P02778 98 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 DRD3P35462 400 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 KLF14Q8TD94 323 aaPredicted RBP9.02□□□□□ -0.97
RTN3-206ENST00000377819 ST6GALNAC6Q969X2 333 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 ELOVL5Q9NYP7 299 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 TMEM8BA6NDV4 472 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 GLRXP35754 106 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 IL9P15248 144 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 LEAP2Q969E1 77 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms