RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 ADIPOQQ15848 244 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 DNAJC4Q9NNZ3 241 aa9.12□□□□□ -0.95
HIF3A-205ENST00000377670 IGHV3-35A0A0C4DH35 117 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 RPS11P62280 158 aaKnown RBP eCLIP9.11□□□□□ -0.95
HIF3A-205ENST00000377670 HERPUD1Q15011 391 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 SPOCK3Q9BQ16 436 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 CRIM1Q9NZV1 1036 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 WNT2P09544 360 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MIEN1Q9BRT3 115 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 SEMA5BQ9P283 1151 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 SPRR3Q9UBC9 169 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 A0A1B0GV72 72 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 PINLYPA6NC86 204 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 FAM201AQ5SY85 155 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MPDZO75970 2070 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 C7orf71A4D174 169 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 DPRXA6NFQ7 191 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MPDU1O75352 247 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 EGR1P18146 543 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 CRYBB3P26998 211 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 SSTR5P35346 364 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 C2orf68Q2NKX9 166 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 C1orf100Q5SVJ3 147 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 TMEM54Q969K7 222 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 TXNDC17Q9BRA2 123 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 PEF1Q9UBV8 284 aaKnown RBP9.11□□□□□ -0.95
HIF3A-205ENST00000377670 LOC102723996A0A087X1L8 192 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MOSP00540 346 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 LINC00869P0C866 280 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MST1P26927 711 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 HIST1H1AQ02539 215 aaPredicted RBP9.11□□□□□ -0.95
HIF3A-205ENST00000377670 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 ZNF645Q8N7E2 425 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 MUC6Q6W4X9 2439 aa9.11□□□□□ -0.95
HIF3A-205ENST00000377670 TICRRQ7Z2Z1 1910 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 PGPA6NDG6 321 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 IFI6P09912 130 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 C3orf36Q3SXR2 165 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 TMEM177Q53S58 311 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 HSPB7Q9UBY9 170 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 PLXNA4Q9HCM2 1894 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 TRGV2A0A075B6R0 118 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 PSMB11A5LHX3 300 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 LHX2P50458 406 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 TMEM187Q14656 261 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 ST6GALNAC6Q969X2 333 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 FBXL7Q9UJT9 491 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 HELZP42694 1942 aaKnown RBP9.1□□□□□ -0.95
HIF3A-205ENST00000377670 MSGN1A6NI15 193 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 PRR32B1ATL7 298 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 NPIPB7O75200 414 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 TCF15Q12870 199 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 ERASQ7Z444 233 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 FGFRL1Q8N441 504 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 REG1AP05451 166 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 COX6CP09669 75 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 CD69Q07108 199 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 UNC119Q13432 240 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
HIF3A-205ENST00000377670 Q6ZS92 163 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 LINC01587Q99440 93 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 DLL3Q9NYJ7 618 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 A0A0G2JNJ9 132 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 ZNF672Q499Z4 452 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-205ENST00000377670 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-205ENST00000377670 ARPC1AQ92747 370 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 VGLL1Q99990 258 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 Q9UFV3 132 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 ABCA4P78363 2273 aa9.1□□□□□ -0.95
HIF3A-205ENST00000377670 TM4SF5O14894 197 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 SMIM13P0DJ93 91 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 NUDT3O95989 172 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 HOXA5P20719 270 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 RND2P52198 227 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 LINC00114Q6XXX2 140 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 SNAI2O43623 268 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 MTURNQ8N3F0 131 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 IMMP2LQ96T52 175 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 FBXL15Q9H469 300 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 PSG9Q00887 426 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
HIF3A-205ENST00000377670 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
HIF3A-205ENST00000377670 ALKBH7Q9BT30 221 aaPredicted RBP9.09□□□□□ -0.95
HIF3A-205ENST00000377670 IGLV3-12A0A075B6K2 115 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 LYPD3O95274 346 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 PRB1P04280 392 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 SELENOTP62341 195 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 LDLRAD2Q5SZI1 272 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 FAM131CQ96AQ9 280 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms