RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 IGHV3OR16-8A0A075B7F1 116 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 LOC102724200A0A096LPH7 203 aaPredicted RBP7.04□□□□□ -1.28
C9orf85-202ENST00000377027 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 TEX50A0A1B0GTY4 177 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 K7EIM0 57 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 TGOLN2O43493 480 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 SCGNO76038 276 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 HPRT1P00492 218 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 HIST1H1BP16401 226 aaKnown RBP7.04□□□□□ -1.28
C9orf85-202ENST00000377027 PTBP1P26599 531 aaKnown RBP eCLIP7.04□□□□□ -1.28
C9orf85-202ENST00000377027 FXYD4P59646 89 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 FAM106AQ4KMX7 169 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 Q6ZRM9 215 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 SLC16A13Q7RTY0 426 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 TMEM17Q86X19 198 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 GDPD1Q8N9F7 314 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 OR51H1Q8NH63 302 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 ST8SIA2Q92186 375 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 SLC5A7Q9GZV3 580 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 HRASLSQ9HDD0 168 aa7.04□□□□□ -1.28
C9orf85-202ENST00000377027 PKD1P98161 4303 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 TRAV25A0A0B4J276 109 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 OR2T8A6NH00 312 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 SERPINE2P07093 398 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 DEFA4P12838 97 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 NQO2P16083 231 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 ELLP55199 621 aaPredicted RBP7.03□□□□□ -1.28
C9orf85-202ENST00000377027 ARPC4P59998 168 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 PMS2P11Q13670 270 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 DEFB135Q30KP9 77 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 IDNKQ5T6J7 187 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 LYG2Q86SG7 212 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 ZBTB34Q8NCN2 500 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 OR5AP2Q8NGF4 316 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 CXorf58Q96LI9 332 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 QTRT1Q9BXR0 403 aaKnown RBP7.03□□□□□ -1.28
C9orf85-202ENST00000377027 PLEKHA2Q9HB19 425 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 NDUFA4L2Q9NRX3 87 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 MRPL27Q9P0M9 148 aaKnown RBP7.03□□□□□ -1.28
C9orf85-202ENST00000377027 SSR3Q9UNL2 185 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 NSG2Q9Y328 171 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 ETV7Q9Y603 341 aa7.03□□□□□ -1.28
C9orf85-202ENST00000377027 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 MARCH11A6NNE9 402 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 TSPAN4O14817 238 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 ZNF207O43670 478 aaKnown RBP7.02□□□□□ -1.29
C9orf85-202ENST00000377027 ATP6V1G2O95670 118 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 DHFRP00374 187 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 IGKV1-39P01597 117 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 IGKV1D-39P04432 117 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 RLN1P04808 185 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 FGF2P09038 288 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 OR13C7P0DN81 318 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 FCGR2BP31994 310 aaPredicted RBP7.02□□□□□ -1.29
C9orf85-202ENST00000377027 RFX2P48378 723 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 AADACL3Q5VUY0 350 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 PLET1Q6UQ28 207 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 OR2C3Q8N628 320 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 OR1L6Q8NGR2 347 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 VN1R17PQ8TDU5 208 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 SCARB1Q8WTV0 552 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 FCAMRQ8WWV6 532 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 FCGR1BQ92637 280 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 MARC2Q969Z3 335 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 MOB3AQ96BX8 217 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 ZNF503Q96F45 646 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
C9orf85-202ENST00000377027 SRSF8Q9BRL6 282 aaKnown RBP7.02□□□□□ -1.29
C9orf85-202ENST00000377027 VCX3BQ9H321 246 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 C5orf66Q9H5L9 145 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 COMMD9Q9P000 198 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
C9orf85-202ENST00000377027 RYR1P21817 5038 aa7.02□□□□□ -1.29
C9orf85-202ENST00000377027 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 A0A0A6YYH2 397 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 A6NJ64 397 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
C9orf85-202ENST00000377027 TRAPPC2P0DI81 140 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 TRAPPC2BP0DI82 140 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 G6PCP35575 357 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 CATR1Q13166 79 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 DHRS11Q6UWP2 260 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 RPP25LQ8N5L8 163 aaKnown RBP7.01□□□□□ -1.29
C9orf85-202ENST00000377027 DMBX1Q8NFW5 382 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 RNF183Q96D59 192 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 COMMD5Q9GZQ3 224 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 DAZ1Q9NQZ3 744 aaKnown RBP7.01□□□□□ -1.29
C9orf85-202ENST00000377027 EHFQ9NZC4 300 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 TP53TG1Q9Y2A0 90 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 UFC1Q9Y3C8 167 aa7.01□□□□□ -1.29
C9orf85-202ENST00000377027 AGRNO00468 2067 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 ERICH4A6NGS2 130 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 NDUFA4O00483 81 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 XRCC3O43542 346 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 SPRY2O43597 315 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 LY6G6CO95867 125 aa7□□□□□ -1.29
C9orf85-202ENST00000377027 PMP2P02689 132 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms