RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 RPEQ96AT9 228 aa12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 SLC25A10Q9UBX3 287 aaPredicted RBP12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
UBQLN1-202ENST00000376395 PGPA6NDG6 321 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 SLC25A17O43808 307 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 KRTCAP3Q53RY4 240 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 ERASQ7Z444 233 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 COQ2Q96H96 371 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 SRSF6Q13247 344 aaKnown RBP12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 FAM216BQ8N7L0 139 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 GNB4Q9HAV0 340 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 SIAH2O43255 324 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 TIMP3P35625 211 aa12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 RPL8P62917 257 aaKnown RBP12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 TBL2Q9Y4P3 447 aaKnown RBP12.31□□□□□ -0.44
UBQLN1-202ENST00000376395 MLANAQ16655 118 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 RNF2Q99496 336 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.448e-7■■■■■ 27.3
UBQLN1-202ENST00000376395 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 MT-ND6P03923 174 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 GFRALQ6UXV0 394 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 LURAP1LQ8IV03 231 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 C9orf106Q8NAJ2 232 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 IL36BQ9NZH7 164 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 PLXNB1O43157 2135 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 MLNRO43193 412 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 PEAR1Q5VY43 1037 aaPredicted RBP12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 MKRN2OSH3BPM6 223 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 FCER1GP30273 86 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 NHLH1Q02575 133 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 COX19Q49B96 90 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 NUP210LQ5VU65 1888 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 DNAJC4Q9NNZ3 241 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 ZNRD1Q9P1U0 126 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 ONECUT1Q9UBC0 465 aa12.3□□□□□ -0.44
UBQLN1-202ENST00000376395 NCBP2LA6PVI3 153 aaKnown RBP12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 OR5AL1P0C617 328 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 RBPJQ06330 500 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 ZNF146Q15072 292 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 MRPS18CQ9Y3D5 142 aaKnown RBP12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 MOSP00540 346 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 ACP1P24666 158 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 FAM222BQ8WU58 562 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 RNF24Q9Y225 148 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 C15orf62A8K5M9 175 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 BMPR1BO00238 502 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 Q6ZS49 121 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 SSX8Q7RTT4 187 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 OR4B1Q8NGF8 309 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 OR2T6Q8NHC8 308 aa12.29□□□□□ -0.44
UBQLN1-202ENST00000376395 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 TNFSF10P50591 281 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 EFNB3Q15768 340 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 MORN2Q502X0 79 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 ST6GALNAC6Q969X2 333 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 ODF3L1Q8IXM7 274 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 TMEM106BQ9NUM4 274 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 IGHV2OR16-5A0A0B4J2B6 119 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 M0R296 226 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 OR4F17Q8NGA8 305 aa12.28□□□□□ -0.44
UBQLN1-202ENST00000376395 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.44
UBQLN1-202ENST00000376395 OR10W1Q8NGF6 305 aa12.27□□□□□ -0.44
UBQLN1-202ENST00000376395 PGLYRP4Q96LB8 373 aa12.27□□□□□ -0.44
UBQLN1-202ENST00000376395 SSBP4Q9BWG4 385 aaPredicted RBP12.27□□□□□ -0.44
UBQLN1-202ENST00000376395 ISLRO14498 428 aa12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.456e-7■■■■□ 24
UBQLN1-202ENST00000376395 CRYABP02511 175 aaKnown RBP12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 GBGT1Q8N5D6 347 aa12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 GCSAMQ8N6F7 178 aa12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 CD177Q8N6Q3 437 aa12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 PERPQ96FX8 193 aa12.27□□□□□ -0.45
UBQLN1-202ENST00000376395 MGST2Q99735 147 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms