RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SAA2P0DJI9 122 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 S4R3C0 116 aa11.92□□□□□ -0.5
TNFRSF1B-201ENST00000376259 PYYP10082 97 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RND2P52198 227 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 EFNB3Q15768 340 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 UTF1Q5T230 341 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IBA57Q5T440 356 aaKnown RBP11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 HINT1P49773 126 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NDUFAF3Q9BU61 184 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 C11orf1Q9H5F2 150 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 ZFHX4Q86UP3 3567 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 F2Z2F3 143 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SLC25A17O43808 307 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SPRNQ5BIV9 151 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 LEMD1Q68G75 181 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 Q6ZS49 121 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RNF7Q9UBF6 113 aa11.91□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 A0A1W2PNU3 283 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 IL19Q9UHD0 177 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TMSB15BA0A087X1C1 80 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 RBP4P02753 201 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 KIR2DL2P43627 348 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TAS2R60P59551 318 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 CORO2AQ92828 525 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 C5orf30Q96GV9 206 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 NOL4LQ96MY1 436 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 SAP30LQ9HAJ7 183 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TIMM9Q9Y5J7 89 aa11.9□□□□□ -0.5
TNFRSF1B-201ENST00000376259 TCF21O43680 179 aa11.9□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ZNF134P52741 427 aa11.9□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TNXAQ16473 311 aa11.9□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ASCL2Q99929 193 aa11.9□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MBNL3Q9NUK0 354 aaKnown RBP11.9□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CEP192Q8TEP8 1941 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 M0R296 226 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IGKV1-16P04430 117 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TDRG1Q3Y452 100 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 AGMATQ9BSE5 352 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IGHV1-18A0A0C4DH31 117 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RAB7AP51149 207 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GNG5P63218 68 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TBL2Q9Y4P3 447 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IGKV1D-17A0A075B6S4 117 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 VSTM5A8MXK1 200 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 M0R2Z0 102 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SP9P0CG40 484 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LYZP61626 148 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GCSAMQ8N6F7 178 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 RAB9BQ9NP90 201 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TMEM242Q9NWH2 141 aa11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MRPS18CQ9Y3D5 142 aaKnown RBP11.89□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CDKN1AP38936 164 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 Q6ZSR3 168 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SERTM2A0A1B0GWG4 89 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MUC21Q5SSG8 566 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CHEK1O14757 476 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 VENTXO95231 258 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CD59P13987 128 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 FOSL1P15407 271 aa11.88□□□□□ -0.51
TNFRSF1B-201ENST00000376259 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PRR33A8MZF0 331 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GFRA3O60609 400 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 LMO1P25800 156 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 BRS3P32247 399 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SPATA45Q537H7 98 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CT45A1Q5HYN5 189 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CT45A3Q8NHU0 189 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 A8MWP6 167 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 APCSP02743 223 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ZCCHC14Q8WYQ9 949 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PMCHL2Q9BQD1 86 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 HCFC1P51610 2035 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 CD24P25063 80 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 VAMP3Q15836 100 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ACSF3Q4G176 576 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MCRIP2Q9BUT9 160 aaKnown RBP11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
TNFRSF1B-201ENST00000376259 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 PGPA6NDG6 321 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MPDU1O75352 247 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 MMP23AO75900 390 aa11.86□□□□□ -0.51
TNFRSF1B-201ENST00000376259 ERVK11-1P61568 191 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms