RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 RPEQ96AT9 228 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 IGKV1-16P04430 117 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 SAA1P0DJI8 122 aaPredicted RBP8.75□□□□□ -1.01
ZNF549-202ENST00000376233 PRB4P10163 310 aaPredicted RBP8.75□□□□□ -1.01
ZNF549-202ENST00000376233 CENPWQ5EE01 88 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 OR2T6Q8NHC8 308 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 BORCS7Q96B45 105 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 SFXN3Q9BWM7 321 aa8.75□□□□□ -1.01
ZNF549-202ENST00000376233 VENTXO95231 258 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 CT45A6P0DMU7 189 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 CT45A5P0DMU8 189 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 CT45A7P0DMV0 189 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 C10orf113Q5VZT2 155 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 LINC01551Q86U37 167 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 VSTM2AQ8TAG5 236 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 ANKHD1Q8IWZ3 2542 aaKnown RBP8.74□□□□□ -1.01
ZNF549-202ENST00000376233 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 PLXNB1O43157 2135 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 LYZP61626 148 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 ASCL3Q9NQ33 180 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 INSIG2Q9Y5U4 225 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 IGF2RP11717 2491 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 MOSP00540 346 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 G0S2P27469 103 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 NUBP1P53384 320 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 ZNF439Q8NDP4 499 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 VN1R17PQ8TDU5 208 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 TBX15Q96SF7 602 aa8.74□□□□□ -1.01
ZNF549-202ENST00000376233 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
ZNF549-202ENST00000376233 ATRXP46100 2492 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 A0A1B0GUS0 222 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 LYNX1G3V0Z9 82 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 C15orf65H3BRN8 121 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 GATCO43716 136 aaKnown RBP8.73□□□□□ -1.01
ZNF549-202ENST00000376233 LYNX1P0DP58 116 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 CD33P20138 364 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 MMD2Q8IY49 270 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 HSPB9Q9BQS6 159 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 PPIHO43447 177 aaKnown RBP8.73□□□□□ -1.01
ZNF549-202ENST00000376233 MMP23AO75900 390 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 AMBPP02760 352 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 KRTCAP3Q53RY4 240 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 TXN2Q99757 166 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 AGMATQ9BSE5 352 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 PAXXQ9BUH6 204 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 RNASE7Q9H1E1 156 aaKnown RBP8.73□□□□□ -1.01
ZNF549-202ENST00000376233 TMEM242Q9NWH2 141 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 HSBP1O75506 76 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 CD3EP07766 207 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 HIST1H1BP16401 226 aaKnown RBP8.73□□□□□ -1.01
ZNF549-202ENST00000376233 PRR31Q5SQ13 230 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 ZNF355PQ9NSJ1 428 aa8.73□□□□□ -1.01
ZNF549-202ENST00000376233 A0A1W2PN81 502 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 PAX5Q02548 391 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 PDPNQ86YL7 162 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 C17orf100A8MU93 164 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 K7EM74 188 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 STAG3L2P0CL84 134 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 STAG3L3P0CL85 134 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 C8orf88P0DMB2 117 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 TIMP3P35625 211 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MFAP2P55001 183 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 HLA-DRB5Q30154 266 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 ZNF114Q8NC26 417 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.72□□□□□ -1.019e-6■■□□□ 12.6
ZNF549-202ENST00000376233 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 A0A1B0GV90 55 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MBD3L4A6NDZ8 208 aaPredicted RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MBD3L3A6NE82 208 aaPredicted RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MBD3L5A6NJ08 208 aaPredicted RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 CCKARP32238 428 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 MBD3L2Q8NHZ7 208 aaPredicted RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 SEBOXQ9HB31 216 aaPredicted RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 DNAJC4Q9NNZ3 241 aa8.72□□□□□ -1.01
ZNF549-202ENST00000376233 ZMAT5Q9UDW3 170 aaKnown RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
ZNF549-202ENST00000376233 UPK2O00526 184 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.01
ZNF549-202ENST00000376233 USF1P22415 310 aaPredicted RBP8.71□□□□□ -1.01
ZNF549-202ENST00000376233 DLX1P56177 255 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.01
ZNF549-202ENST00000376233 UTF1Q5T230 341 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 OR4C13Q8NGP0 309 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 OR1L4Q8NGR5 311 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 LINC01560Q8TB33 94 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 FAM57AQ8TBR7 257 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 DKK4Q9UBT3 224 aa8.71□□□□□ -1.01
ZNF549-202ENST00000376233 RALYQ9UKM9 306 aaKnown RBP8.71□□□□□ -1.01
ZNF549-202ENST00000376233 DLL1O00548 723 aa8.71□□□□□ -1.02
ZNF549-202ENST00000376233 LGALS4P56470 323 aa8.71□□□□□ -1.02
ZNF549-202ENST00000376233 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
ZNF549-202ENST00000376233 TMEM170AQ8WVE7 144 aa8.71□□□□□ -1.02
ZNF549-202ENST00000376233 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
ZNF549-202ENST00000376233 TMEM106BQ9NUM4 274 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms