RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PLCXD3Q63HM9 321 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM204Q9BSN7 226 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 ERRFI1Q9UJM3 462 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-203ENST00000375315 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 IGHV3-64DA0A0J9YX35 117 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 C9JCJ5 164 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 CA7P43166 264 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 SPACA3Q8IXA5 215 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 AP1S3Q96PC3 154 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 CACNA1BQ00975 2339 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 J3QW42 95 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 GNG7O60262 68 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 NPY1RP25929 384 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 IGFBP7Q16270 282 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 ZNF611Q8N823 705 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
C9orf3-203ENST00000375315 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 ARL2-SNX15V9GYD0 113 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 LYZL6O75951 148 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 RPL31P62899 125 aaKnown RBP10.09□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 RPRMLQ8N4K4 120 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 C5orf17Q8NAS9 161 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 CPT1CQ8TCG5 803 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 OR4C46A6NHA9 309 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 MT-CO2P00403 227 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 CELA3BP08861 270 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 PCSK4Q6UW60 755 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 CHRDL1Q9BU40 450 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
C9orf3-203ENST00000375315 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
C9orf3-203ENST00000375315 COL12A1Q99715 3063 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 ZFYVE26Q68DK2 2539 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 CDIPTO14735 213 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 CXorf1O96002 111 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 ARL14EPLP0DKL9 152 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 TNXAQ16473 311 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 PIGCQ92535 297 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 NABP1Q96AH0 204 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 PPP1R3CQ9UQK1 317 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 PKDREJQ9NTG1 2253 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 HSPB6O14558 160 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 SSTR5P35346 364 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 SCGB2A2Q13296 93 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 VWC2Q2TAL6 325 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 TMEM54Q969K7 222 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 SMPXQ9UHP9 88 aa10.08□□□□□ -0.8
C9orf3-203ENST00000375315 C7orf71A4D174 169 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 SMPD2O60906 423 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 HAND1O96004 215 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 GPR6P46095 362 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 EDDM3BP56851 147 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 SLC35B1P78383 322 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 HIST1H1AQ02539 215 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 FOXL2NBQ6ZUU3 175 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 COMMD5Q9GZQ3 224 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 TMEM38BQ9NVV0 291 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 TRGV10A0A0A0MS01 117 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 PMS2P5A8MQ11 134 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 OR10J4P0C629 311 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 FOXF2Q12947 444 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 DAZAP2Q15038 168 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF585BQ52M93 769 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 GCSAMLQ5JQS6 135 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 C10orf128Q5T292 105 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 FGFRL1Q8N441 504 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 OR5A2Q8NGI9 324 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF503-AS2A6NEH8 195 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 C2orf70A6NJV1 201 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 GOSR1O95249 250 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 GATA2P23769 480 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-203ENST00000375315 CRYBB3P26998 211 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 SPATA46Q5T0L3 261 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 KCNS2Q9ULS6 477 aa10.07□□□□□ -0.8
C9orf3-203ENST00000375315 USF1P22415 310 aaPredicted RBP10.06□□□□□ -0.8
C9orf3-203ENST00000375315 TCL1AP56279 114 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 PSG3Q16557 428 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 PRR30Q53SZ7 412 aaPredicted RBP10.06□□□□□ -0.8
C9orf3-203ENST00000375315 UFSP1Q6NVU6 142 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 RNASEKQ6P5S7 137 aaKnown RBP10.06□□□□□ -0.8
C9orf3-203ENST00000375315 C11orf52Q96A22 123 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 HEATR1Q9H583 2144 aaKnown RBP10.06□□□□□ -0.8
C9orf3-203ENST00000375315 C5orf49A4QMS7 147 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 CD1BP29016 333 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 GNG4P50150 75 aa10.06□□□□□ -0.8
C9orf3-203ENST00000375315 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
C9orf3-203ENST00000375315 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms