RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 HOXB4P17483 251 aaPredicted RBP11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PPT1P50897 306 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 UBE2E1P51965 193 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 EBI3Q14213 229 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ICAM4Q14773 271 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TPSG1Q9NRR2 321 aa11.17□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 IGLC7A0M8Q6 106 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 YIF1AO95070 293 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 NDUFA3O95167 84 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SRP19P09132 144 aaKnown RBP11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 LCN2P80188 198 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRR20EP86478 221 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRR20CP86479 221 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRR20DP86480 221 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRR20BP86481 221 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PRR20AP86496 221 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SRSF1Q07955 248 aaKnown RBP eCLIP11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 GAMTQ14353 236 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 FAM168AQ92567 244 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RAB24Q969Q5 203 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 P2RX4Q99571 388 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PIMREGQ9BSJ6 248 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 METTL1Q9UBP6 276 aaKnown RBP11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 FLNCQ14315 2725 aa11.16□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 A0A1B0GV50 99 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 ACTL6BO94805 426 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 TOX4O94842 621 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MOSP00540 346 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 BCL2P10415 239 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 CNTFRP26992 372 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RPL27AP46776 148 aaKnown RBP11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 KLRD1Q13241 179 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 BTN1A1Q13410 526 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 C10orf55Q5SWW7 151 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 RBMS3Q6XE24 437 aaKnown RBP11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 LHFPL4Q7Z7J7 247 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 MALSU1Q96EH3 234 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
NIPSNAP3A-201ENST00000374767 EPG5Q9HCE0 2579 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 IFNA1P01562 189 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 OR13C7P0DN81 318 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 PAX8Q06710 450 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 TBX15Q96SF7 602 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 MYO18BQ8IUG5 2567 aa11.14□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 DNASE2O00115 360 aaPredicted RBP11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 TSPAN9O75954 239 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 CRYGCP07315 174 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 LGALS4P56470 323 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 DSCR9P59020 149 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 HAGHQ16775 308 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 Q8N6K4 173 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 CLRN3Q8NCR9 226 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 OR2T10Q8NGZ9 312 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 OR1P1Q8NH06 330 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 LPAR2Q9HBW0 351 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 GNG13Q9P2W3 67 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 VAX2Q9UIW0 290 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 HILPDAQ9Y5L2 63 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 IGKV1OR2-108A0A075B7D4 117 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 TEX22C9J3V5 150 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 NBR2O15453 112 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 LINC00869P0C866 280 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 PSMB3P49720 205 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 ATP5J2P56134 94 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 B2MP61769 119 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 HNF4GQ14541 408 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 MIC13Q5XKP0 118 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 CLEC2AQ6UVW9 174 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SUN5Q8TC36 379 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SLC35E1Q96K37 410 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SLC25A22Q9H936 323 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 AKAP6Q13023 2319 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 CORTO00230 105 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 SSX2Q16385 188 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 TNXAQ16473 311 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
NIPSNAP3A-201ENST00000374767 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms