RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 VSTM5A8MXK1 200 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 DVL1O14640 695 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 APOA2P02652 100 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 DEFA4P12838 97 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 AREGP15514 252 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 HIST1H1BP16401 226 aaKnown RBP11.4□□□□□ -0.58
HMGCL-203ENST00000374490 GNG10P50151 68 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 PDLIM4P50479 330 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 FAM27E3Q08E93 113 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 FOXL1Q12952 345 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 EFNB3Q15768 340 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 ZNF833PQ6ZTB9 187 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 PNKDQ8N490 385 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 DEFB108BQ8NET1 73 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 HIST1H2BLQ99880 126 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.58
HMGCL-203ENST00000374490 USP9YO00507 2555 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-203ENST00000374490 C16orf97H3BN30 126 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 OR1L8Q8NGR8 309 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 OR4A5Q8NH83 315 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 SSMEM1Q8WWF3 244 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 C1orf159Q96HA4 380 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 SFRP2Q96HF1 295 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 SLC45A2Q9UMX9 530 aa11.39□□□□□ -0.59
HMGCL-203ENST00000374490 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 C17orf100A8MU93 164 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 C9JCJ5 164 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 GATCO43716 136 aaKnown RBP11.38□□□□□ -0.59
HMGCL-203ENST00000374490 RNF224P0DH78 156 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 CT45A6P0DMU7 189 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 CT45A5P0DMU8 189 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 CT45A7P0DMV0 189 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 NDUFB7P17568 137 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 CHRNA7P36544 502 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 PDZD11Q5EBL8 140 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 FAM78BQ5VT40 261 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
HMGCL-203ENST00000374490 RNF2Q99496 336 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 FUT9Q9Y231 359 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 INS-IGF2F8WCM5 200 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 CCKARP32238 428 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 TAS2R45P59539 299 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 UTF1Q5T230 341 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 C8orf31Q8N9H6 132 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 OR5T1Q8NG75 326 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 RND1Q92730 232 aa11.38□□□□□ -0.59
HMGCL-203ENST00000374490 TECRQ9NZ01 308 aaKnown RBP11.38□□□□□ -0.59
HMGCL-203ENST00000374490 NOTCH2Q04721 2471 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 A0A1W2PN81 502 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 SCO2A0A1W2PP80 73 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 LINC00869P0C866 280 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 IGFBP2P18065 325 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 IL3RAP26951 378 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 VSTM2AQ8TAG5 236 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 CACNG8Q8WXS5 425 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 YTHDF2Q9Y5A9 579 aaKnown RBP11.37□□□□□ -0.59
HMGCL-203ENST00000374490 USF3Q68DE3 2245 aa11.37□□□□□ -0.59
HMGCL-203ENST00000374490 SPENQ96T58 3664 aaKnown RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 TRAV20A0A0B4J274 112 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 TEX50A0A1B0GTY4 177 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 AMBPP02760 352 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 PKIAP61925 76 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 WFDC8Q8IUA0 241 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 ZNF714Q96N38 554 aa11.36□□□□□ -0.59
HMGCL-203ENST00000374490 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 USP9XQ93008 2570 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 SPTAN1Q13813 2472 aaKnown RBP11.36□□□□□ -0.59
HMGCL-203ENST00000374490 PPIAL4EA0A075B759 164 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 A0A0U1RQK1 487 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 ZNF320A2RRD8 509 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 PPIAL4DF5H284 164 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 MMP23AO75900 390 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 GCGP01275 180 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 OR4A8P0C604 315 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 PPIAL4FP0DN26 164 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 RPL15P61313 204 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 ERHP84090 104 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 PDPNQ86YL7 162 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms