RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 OR4A16Q8NH70 328 aa11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 PCNPQ8WW12 178 aaKnown RBP11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 TMED6Q8WW62 240 aa11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 CXorf58Q96LI9 332 aa11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 CRLF1O75462 422 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 SCAF4O95104 1147 aaKnown RBP11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 SEC11BP0C7V7 166 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 RPL8P62917 257 aaKnown RBP11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 PLGLAQ15195 96 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 PRSS8Q16651 343 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 MMD2Q8IY49 270 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF430Q9H8G1 570 aaPredicted RBP11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 FOXA2Q9Y261 457 aaPredicted RBP11.64□□□□□ -0.55
SMPDL3B-201ENST00000373888 FAM24AA6NFZ4 105 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 I3L521 148 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 M0QZK8 103 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 DFFBO76075 338 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 FAM157CP0CG43 387 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 MAS1LP35410 378 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 SULT1A2P50226 295 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 RAB5CP51148 216 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR2B8PP59922 312 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 BLOC1S1P78537 153 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 SMIM8Q96KF7 97 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 SMIM3Q9BZL3 60 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 FKBP11Q9NYL4 201 aa11.63□□□□□ -0.55
SMPDL3B-201ENST00000373888 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 CLDN34H7C241 214 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 FCN1O00602 326 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 RBMXL2O75526 392 aaKnown RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 HLA-DRB1P01911 266 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 AMY1AP04745 511 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 ATF4P18848 351 aaPredicted RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 NHLH2Q02577 135 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 TOR2AQ5JU69 321 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 RASL11BQ9BPW5 248 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 QTRT1Q9BXR0 403 aaKnown RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF257Q9Y2Q1 563 aa11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 FN1P02751 2386 aaKnown RBP11.62□□□□□ -0.55
SMPDL3B-201ENST00000373888 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 DNAJC9-AS1A6NH13 148 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 KRBOX1C9JBD0 128 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 CA2P00918 260 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 SULT1A1P50225 295 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 PAX9P55771 341 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 SSBP2P81877 361 aaPredicted RBP11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 TNFRSF9Q07011 255 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 PDLIM3Q53GG5 364 aaPredicted RBP11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 UQCC3Q6UW78 93 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR1S2Q8NGQ3 325 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR5B3Q8NH48 314 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 CLCC1Q96S66 551 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 COMMD5Q9GZQ3 224 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR51B2Q9Y5P1 312 aa11.61□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 SPP1P10451 314 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 COMPP49747 757 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 HILS1P60008 231 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 HBG1P69891 147 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 HBG2P69892 147 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 PXDC1Q5TGL8 231 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZNF562Q6V9R5 426 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 STPG2Q8N412 459 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 MARC2Q969Z3 335 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 ESM1Q9NQ30 184 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 TNFRSF19Q9NS68 423 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 PSENENQ9NZ42 101 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 STRAPQ9Y3F4 350 aaKnown RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 TEX50A0A1B0GTY4 177 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 TEX46H3BTG2 121 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 ACTL6BO94805 426 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 MYOD1P15172 320 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 ZP3P21754 424 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 HOXA1P49639 335 aaPredicted RBP11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 SPCS3P61009 180 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 COTL1Q14019 142 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 TNXAQ16473 311 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 OR5C1Q8NGR4 320 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 WFDC1Q9HC57 220 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 PARP11Q9NR21 331 aa11.6□□□□□ -0.55
SMPDL3B-201ENST00000373888 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
SMPDL3B-201ENST00000373888 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
SMPDL3B-201ENST00000373888 NXPH3O95157 252 aa11.59□□□□□ -0.55
SMPDL3B-201ENST00000373888 TMEM50AO95807 157 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms