RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 EAF1Q96JC9 268 aaPredicted RBP11.98□□□□□ -0.49
LMX1B-202ENST00000373474 NUTF2P61970 127 aaKnown RBP11.98□□□□□ -0.49
LMX1B-202ENST00000373474 ATP1A1-AS1Q5TC04 95 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 PNKDQ8N490 385 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 GREB1Q4ZG55 1949 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 PIKFYVEQ9Y2I7 2098 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 DLEU1O43261 78 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 CNTFRP26992 372 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 FAM159AQ6UWV7 190 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
LMX1B-202ENST00000373474 ST20Q9HBF5 79 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 IGKV3-15P01624 115 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 MS4A6AQ9H2W1 248 aa11.98□□□□□ -0.49
LMX1B-202ENST00000373474 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
LMX1B-202ENST00000373474 CELA3AP09093 270 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 SP9P0CG40 484 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 C17orf98A8MV24 154 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 PEX7O00628 323 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 SFTPCP11686 197 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 EGR1P18146 543 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
LMX1B-202ENST00000373474 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 CRIPAKQ8N1N5 446 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 NPIPB3Q92617 1050 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 A0A0G2JMM0 328 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 A0A1W2PPB8 328 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 KIR3DP1A8MWS1 328 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 PROB1E7EW31 1015 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 FGF16O43320 207 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 TNFSF13O75888 250 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 FAM106AQ4KMX7 169 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 ATXN7O15265 892 aaPredicted RBP11.96□□□□□ -0.49
LMX1B-202ENST00000373474 ASIPP42127 132 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 SRSF4Q08170 494 aaKnown RBP11.96□□□□□ -0.49
LMX1B-202ENST00000373474 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
LMX1B-202ENST00000373474 FGF11Q92914 225 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF585BQ52M93 769 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 OR5AN1Q8NGI8 311 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 UCNP55089 124 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 SRSF6Q13247 344 aaKnown RBP11.96□□□□□ -0.49
LMX1B-202ENST00000373474 ZNF479Q96JC4 524 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 MGST2Q99735 147 aa11.96□□□□□ -0.49
LMX1B-202ENST00000373474 IGLV3-32A0A0A0MS00 114 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 TGFAP01135 160 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 ACSF3Q4G176 576 aaPredicted RBP11.96□□□□□ -0.5
LMX1B-202ENST00000373474 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 IGLV3-12A0A075B6K2 115 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 A0A0A6YYD4 124 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 ICAM4Q14773 271 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 FAM89BQ8N5H3 189 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 ZNRF1Q8ND25 227 aa11.96□□□□□ -0.5
LMX1B-202ENST00000373474 ZNF837Q96EG3 531 aaPredicted RBP11.96□□□□□ -0.5
LMX1B-202ENST00000373474 TM4SF5O14894 197 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 DPM2O94777 84 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 ATXN8Q156A1 80 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 SCO2A0A1W2PP80 73 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 NDUFA3O95167 84 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 ADMP35318 185 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 DOCK4Q8N1I0 1966 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 TRBV6-7A0A0A0MS04 114 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 SLC25A20O43772 301 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 TFPI2P48307 235 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 C1orf162Q8NEQ5 155 aaPredicted RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 OR9G4Q8NGQ1 327 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 IMMP1LQ96LU5 166 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 NPFFR1Q9GZQ6 430 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 CGAP01215 116 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 MRPL14Q6P1L8 145 aaKnown RBP11.95□□□□□ -0.5
LMX1B-202ENST00000373474 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 OR13A1Q8NGR1 328 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 SLC25A15Q9Y619 301 aa11.95□□□□□ -0.5
LMX1B-202ENST00000373474 IGKV1-9A0A0C4DH69 117 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 IGFBP2P18065 325 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
LMX1B-202ENST00000373474 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
LMX1B-202ENST00000373474 TRAV24A0A0B4J272 114 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms