RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ZNF474Q6S9Z5 364 aaPredicted RBP12.29□□□□□ -0.44
NDC1-201ENST00000371429 RNASEH2CQ8TDP1 164 aaKnown RBP12.29□□□□□ -0.44
NDC1-201ENST00000371429 UPK2O00526 184 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 SELLP14151 372 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 IGFBP2P18065 325 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 C2orf83Q53S99 150 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 PSMG3Q9BT73 122 aaPredicted RBP12.28□□□□□ -0.44
NDC1-201ENST00000371429 LINC00862A6NCI5 91 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 MYOD1P15172 320 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
NDC1-201ENST00000371429 FAM166AQ6J272 317 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 MGAMO43451 1857 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 TMEM178BH3BS89 294 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
NDC1-201ENST00000371429 PGLYRP4Q96LB8 373 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 ERVH48-1M5A8F1 160 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 U3KQA8 63 aa12.28□□□□□ -0.44
NDC1-201ENST00000371429 GCGP01275 180 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 NMBP08949 121 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 RTBDNQ9BSG5 229 aaPredicted RBP12.27□□□□□ -0.44
NDC1-201ENST00000371429 NPCDR1Q9BY65 106 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 J3QR89 54 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 MT-ND6P03923 174 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 TRGC1P0CF51 173 aa12.27□□□□□ -0.44
NDC1-201ENST00000371429 CEACAM4O75871 244 aa12.27□□□□□ -0.45
NDC1-201ENST00000371429 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.45
NDC1-201ENST00000371429 SP5Q6BEB4 398 aaPredicted RBP12.27□□□□□ -0.45
NDC1-201ENST00000371429 SRSF9Q13242 221 aaKnown RBP eCLIP12.27□□□□□ -0.45
NDC1-201ENST00000371429 ZNF56Q15929 161 aa12.27□□□□□ -0.45
NDC1-201ENST00000371429 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.45
NDC1-201ENST00000371429 C9JCJ5 164 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 PLAURQ03405 335 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
NDC1-201ENST00000371429 RHOGP84095 191 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 GPR82Q96P67 336 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 RPRMQ9NS64 109 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 FER1L5A0AVI2 2057 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 PCNX2A6NKB5 2137 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 DPRXA6NFQ7 191 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 TEX45Q8NA69 505 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 SLC25A28Q96A46 364 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 PTPRQQ9UMZ3 2332 aa12.26□□□□□ -0.45
NDC1-201ENST00000371429 A0A0B4J293 547 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 DANCRP0C864 163 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 HEPN1Q6WQI6 88 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 ACACBO00763 2458 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
NDC1-201ENST00000371429 Q5BKY6 102 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 CYB5R2Q6BCY4 276 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 LINC00527Q9UJ94 153 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 MPDZO75970 2070 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
NDC1-201ENST00000371429 FHITP49789 147 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 OR52E5Q8NH55 327 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 IGHV2-26A0A0B4J1V2 119 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 M0R3E3 92 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 VMO1Q7Z5L0 202 aa12.25□□□□□ -0.45
NDC1-201ENST00000371429 PACRGQ96M98 296 aaPredicted RBP12.25□□□□□ -0.45
NDC1-201ENST00000371429 DCAF16Q9NXF7 216 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 MED13LQ71F56 2210 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 CD8AP01732 235 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 NR2C2APQ86WQ0 139 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 J3QRE1 110 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
NDC1-201ENST00000371429 DUTP33316 252 aaKnown RBP12.24□□□□□ -0.45
NDC1-201ENST00000371429 PSMB2P49721 201 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 TBX15Q96SF7 602 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 RARRES2Q99969 163 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 LY6HO94772 140 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 IGHV1-8P0DP01 117 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 GATA2P23769 480 aaPredicted RBP12.24□□□□□ -0.45
NDC1-201ENST00000371429 TFF3Q07654 80 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 ADIPOQQ15848 244 aa12.24□□□□□ -0.45
NDC1-201ENST00000371429 RCC1LQ96I51 464 aaKnown RBP12.24□□□□□ -0.45
NDC1-201ENST00000371429 HLA-DRB1P01911 266 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 SLC25A16P16260 332 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 TMEM200BQ69YZ2 307 aa12.23□□□□□ -0.45
NDC1-201ENST00000371429 OR11H4Q8NGC9 324 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms