RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 TEX50A0A1B0GTY4 177 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 OR5I1Q13606 314 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 FAM209BQ5JX69 171 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 TMEM200BQ69YZ2 307 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
RAB39B-201ENST00000369454 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
RAB39B-201ENST00000369454 FOXA2Q9Y261 457 aaPredicted RBP9.39□□□□□ -0.91
RAB39B-201ENST00000369454 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 MDFIC2A0A1B0GVS7 189 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PPIAL4DF5H284 164 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 FAM87AP0C7U9 286 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 RHOBP62745 196 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
RAB39B-201ENST00000369454 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PPIAL4AQ9Y536 164 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 WNK2Q9Y3S1 2297 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 IGHV2-70P01814 119 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 IL3RAP26951 378 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 DIRC2Q96SL1 478 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 KCNIP2Q9NS61 270 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
RAB39B-201ENST00000369454 UPK2O00526 184 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PHOX2AO14813 284 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 SLC35B1P78383 322 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PMS2P11Q13670 270 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 HLA-DRB5Q30154 266 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 IGF2-ASQ6U949 168 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 Q8NA96 180 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 NABP2Q9BQ15 211 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 PRNDQ9UKY0 176 aa9.38□□□□□ -0.91
RAB39B-201ENST00000369454 CACNA1BQ00975 2339 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 ARHGAP32A7KAX9 2087 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 TRGV8A0A0C4DH27 118 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 PLAUP00749 431 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 AARDQ4LEZ3 155 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 C19orf35Q6ZS72 473 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 SFRP2Q96HF1 295 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 IMMP2LQ96T52 175 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 PITPNC1Q9UKF7 332 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 DVL1O14640 695 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 APOA2P02652 100 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 CRYBB3P26998 211 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 LGALS4P56470 323 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 CTAG1AP78358 180 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 SSBP2P81877 361 aaPredicted RBP9.37□□□□□ -0.91
RAB39B-201ENST00000369454 ADTRPQ96IZ2 230 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 GAL3ST2Q9H3Q3 398 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 LINC00312Q9Y6C7 94 aa9.37□□□□□ -0.91
RAB39B-201ENST00000369454 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 OR1P1Q8NH06 330 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 RITA1Q96K30 269 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 TRAPPC1Q9Y5R8 145 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
RAB39B-201ENST00000369454 GRIFINA4D1Z8 144 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 NDUFB3O43676 98 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 FRMD6-AS1P0C7T7 363 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 NUBP1P53384 320 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 RAB1CQ92928 201 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 FLYWCH2Q96CP2 140 aaKnown RBP9.36□□□□□ -0.91
RAB39B-201ENST00000369454 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 SLC25A17O43808 307 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 VENTXO95231 258 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 AMBPP02760 352 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
RAB39B-201ENST00000369454 CTSZQ9UBR2 303 aa9.36□□□□□ -0.91
RAB39B-201ENST00000369454 TMEM178BH3BS89 294 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 TMPRSS3P57727 454 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
RAB39B-201ENST00000369454 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 HCP5Q6MZN7 132 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 LINC00869P0C866 280 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 TDGF1P3P51864 188 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 TCL1AP56279 114 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
RAB39B-201ENST00000369454 ZNF90Q03938 601 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 FXYD3Q14802 87 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 TEX36Q5VZQ5 186 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 IGFBPL1Q8WX77 278 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 H0YJW9 148 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 K7EN84 100 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
RAB39B-201ENST00000369454 CBLN1P23435 193 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
RAB39B-201ENST00000369454 LRRC10Q5BKY1 277 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms