RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 OR2G3Q8NGZ4 309 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 FBXO7Q9Y3I1 522 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 TBL2Q9Y4P3 447 aaKnown RBP11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 MOSP00540 346 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 HES1Q14469 280 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
HMGCS2-201ENST00000369406 ACANP16112 2415 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 MFAP2P55001 183 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 Q6ZRG5 221 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 TMEM147Q9BVK8 224 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 NBR2O15453 112 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 NDUFA3O95167 84 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 SSX7Q7RTT5 188 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 NPBQ8NG41 125 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 ENY2Q9NPA8 101 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
HMGCS2-201ENST00000369406 A0A0U1RQK1 487 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 B4DSR2 109 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 IFNA5P01569 189 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 IFNA4P05014 189 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 EBI3Q14213 229 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 MALSU1Q96EH3 234 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 Q96MF0 132 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 DMRT1Q9Y5R6 373 aa11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 ANK3Q12955 4377 aaKnown RBP11.22□□□□□ -0.61
HMGCS2-201ENST00000369406 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 OR13C7P0DN81 318 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 FGF7P21781 194 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 NDPQ00604 133 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 SLC25A24Q6NUK1 477 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 BTNL8Q6UX41 500 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 MMD2Q8IY49 270 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 PINX1Q96BK5 328 aaKnown RBP11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 LINC00052Q96N35 136 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 P2RX4Q99571 388 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 HRH4Q9H3N8 390 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 MED9Q9NWA0 146 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 A0A1B0GV50 99 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 NUPL2O15504 423 aaKnown RBP11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 DEFA4P12838 97 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 EIF5AL1Q6IS14 154 aaKnown RBP11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 CCDC144NLQ6NUI1 221 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 RNF5Q99942 180 aa11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 FAM103A1Q9BTL3 118 aaKnown RBP11.21□□□□□ -0.61
HMGCS2-201ENST00000369406 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 IGHV3-48P01763 117 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 IGHV4-31P0DP07 118 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 C2orf83Q53S99 150 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 FAM213BQ8TBF2 198 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 PIFOQ8TCI5 191 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 NPCDR1Q9BY65 106 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 MRPL36Q9P0J6 103 aaKnown RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 SONP18583 2426 aaKnown RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 MYO9AB2RTY4 2548 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 SMCO3A2RU48 225 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 LOXL1Q08397 574 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 PLGLAQ15195 96 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 LINC01356Q8N9X3 169 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 SCGB1C1Q8TD33 95 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 MBD6Q96DN6 1003 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 GNPNAT1Q96EK6 184 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 MGST2Q99735 147 aa11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
HMGCS2-201ENST00000369406 IGKV1OR2-108A0A075B7D4 117 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 AGPAT2O15120 278 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 TMEM11P17152 192 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 ZP3P21754 424 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 CCL20P78556 96 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 ATP6V1FQ16864 119 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 LURAP1LQ8IV03 231 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 SAT2Q96F10 170 aaPredicted RBP11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 PARP11Q9NR21 331 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 RPRMQ9NS64 109 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 CUBNO60494 3623 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 CAMLGP49069 296 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 RAB2AP61019 212 aa11.19□□□□□ -0.62
HMGCS2-201ENST00000369406 RPP30P78346 268 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms