RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HSD17B13Q7Z5P4 300 aaPredicted RBP18.95■□□□□ 0.62
SNX3-203ENST00000368979 BCL6BQ8N143 479 aaPredicted RBP18.95■□□□□ 0.62
SNX3-203ENST00000368979 HSD17B11Q8NBQ5 300 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 ZNF114Q8NC26 417 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 TMED6Q8WW62 240 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 SLC25A33Q9BSK2 321 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 PARD6GQ9BYG4 376 aaPredicted RBP18.95■□□□□ 0.62
SNX3-203ENST00000368979 MAP1AP78559 2803 aaPredicted RBP18.95■□□□□ 0.62
SNX3-203ENST00000368979 ITPR2Q14571 2701 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 MDFIC2A0A1B0GVS7 189 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 IFNA5P01569 189 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 AREGP15514 252 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 CX3CL1P78423 397 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 DEFB112Q30KQ8 113 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 P2RX4Q99571 388 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 GGACTQ9BVM4 153 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 UQCC1Q9NVA1 299 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 MOB4Q9Y3A3 225 aa18.95■□□□□ 0.62
SNX3-203ENST00000368979 ITPR3Q14573 2671 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 RPS10-NUDT3A0A1W2PQS6 291 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 A6NDX4 124 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 H3BUX3 64 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 SPP1P10451 314 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 FAM74A1Q5RGS3 127 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 EIF5AL1Q6IS14 154 aaKnown RBP18.94■□□□□ 0.62
SNX3-203ENST00000368979 C5orf56Q8N8D9 126 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 RASL11BQ9BPW5 248 aa18.94■□□□□ 0.62
SNX3-203ENST00000368979 IGHV7-81A0A0B4J1V7 117 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 UBE2L5PA0A1B0GUS4 154 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 FBXO24O75426 580 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 SEC11BP0C7V7 166 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 ATP6V0CP27449 155 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 DLK1P80370 383 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 NDPQ00604 133 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 PVRIGQ6DKI7 326 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 TMEM219Q86XT9 240 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 SSMEM1Q8WWF3 244 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 ARPC1AQ92747 370 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 WDR61Q9GZS3 305 aaKnown RBP18.93■□□□□ 0.62
SNX3-203ENST00000368979 SH3BGRL3Q9H299 93 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 SVEP1Q4LDE5 3571 aa18.93■□□□□ 0.62
SNX3-203ENST00000368979 FGF16O43320 207 aa18.92■□□□□ 0.62
SNX3-203ENST00000368979 CD5LO43866 347 aa18.92■□□□□ 0.62
SNX3-203ENST00000368979 REG1AP05451 166 aa18.92■□□□□ 0.62
SNX3-203ENST00000368979 SUB1P53999 127 aaKnown RBP eCLIP18.92■□□□□ 0.625e-28■■□□□ 12.7
SNX3-203ENST00000368979 CREBBPQ92793 2442 aa18.92■□□□□ 0.62
SNX3-203ENST00000368979 APELAP0DMC3 54 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 MDKP21741 143 aaPredicted RBP18.91■□□□□ 0.62
SNX3-203ENST00000368979 RUNX1Q01196 453 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 CLLU1Q5K131 121 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 SLC25A24Q6NUK1 477 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 TEX29Q8N6K0 151 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 C22orf15Q8WYQ4 148 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 SLC25A32Q9H2D1 315 aa18.91■□□□□ 0.62
SNX3-203ENST00000368979 SCGB1C1Q8TD33 95 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 GNPNAT1Q96EK6 184 aaPredicted RBP18.9■□□□□ 0.62
SNX3-203ENST00000368979 HSPB9Q9BQS6 159 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 FAM103A1Q9BTL3 118 aaKnown RBP18.9■□□□□ 0.62
SNX3-203ENST00000368979 PLA2G2EQ9NZK7 142 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 FNDC10F2Z333 226 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 LY6EQ16553 131 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 ARSJQ5FYB0 599 aaPredicted RBP18.9■□□□□ 0.62
SNX3-203ENST00000368979 RNASEH2CQ8TDP1 164 aaKnown RBP18.9■□□□□ 0.62
SNX3-203ENST00000368979 ABHD5Q8WTS1 349 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 TAF15Q92804 592 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNX3-203ENST00000368979 PITPNC1Q9UKF7 332 aa18.9■□□□□ 0.62
SNX3-203ENST00000368979 F11RQ9Y624 299 aaKnown RBP18.9■□□□□ 0.62
SNX3-203ENST00000368979 PLXNB1O43157 2135 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 AMY1AP04745 511 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 NMBP08949 121 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 FAM157CP0CG43 387 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 MFAP2P55001 183 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 OR1P1Q8NH06 330 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 PCNPQ8WW12 178 aaKnown RBP18.89■□□□□ 0.61
SNX3-203ENST00000368979 WDR83OSQ9Y284 106 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 FBXO7Q9Y3I1 522 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 RFNGQ9Y644 331 aa18.89■□□□□ 0.61
SNX3-203ENST00000368979 EGR2P11161 476 aaPredicted RBP18.88■□□□□ 0.61
SNX3-203ENST00000368979 CTRB1P17538 263 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 SULT1A2P50226 295 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 RAB14P61106 215 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 CD69Q07108 199 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 ASPHD1Q5U4P2 390 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 CTRB2Q6GPI1 263 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 C19orf35Q6ZS72 473 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 C16orf82Q7Z2V1 217 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 PRDM13Q9H4Q3 707 aa18.88■□□□□ 0.61
SNX3-203ENST00000368979 ZANQ9Y493 2812 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 IER3P46695 156 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 TREML4Q6UXN2 200 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 RNF141Q8WVD5 230 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 ZNF48Q96MX3 618 aaPredicted RBP18.87■□□□□ 0.61
SNX3-203ENST00000368979 PSMG3Q9BT73 122 aaPredicted RBP18.87■□□□□ 0.61
SNX3-203ENST00000368979 RSG1Q9BU20 258 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 ABCA1O95477 2261 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 CCDC168Q8NDH2 2452 aa18.87■□□□□ 0.61
SNX3-203ENST00000368979 IGHV4-59P01825 116 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 CRYGCP07315 174 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 FGF7P21781 194 aa18.86■□□□□ 0.61
SNX3-203ENST00000368979 GPX4P36969 197 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms