RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 C5orf66Q9H5L9 145 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 SLC2A8Q9NY64 477 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
CD48-202ENST00000368046 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 V9GYH0 126 aa7.54□□□□□ -1.2
CD48-202ENST00000368046 TGP01266 2768 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 TRBV7-1A0A0A6YYK4 115 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 TEX13DA0A0J9YY54 714 aaPredicted RBP7.53□□□□□ -1.2
CD48-202ENST00000368046 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 C15orf61A6NNL5 157 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 BMPR1BO00238 502 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 CLEC3BP05452 202 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 UCP1P25874 307 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 SYNJ2BPP57105 145 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 AP3S2P59780 193 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 DHODHQ02127 395 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
CD48-202ENST00000368046 SLC25A24Q6NUK1 477 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 TOMM5Q8N4H5 51 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 OR6Q1Q8NGQ2 317 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 GLYATL2Q8WU03 294 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 DEDD2Q8WXF8 326 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 TMEM222Q9H0R3 208 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 SIGLEC8Q9NYZ4 499 aa7.53□□□□□ -1.2
CD48-202ENST00000368046 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
CD48-202ENST00000368046 A0A0B4J293 547 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 OR2C1O95371 312 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 IGKV1-5P01602 117 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 IGLV1-51P01701 117 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 P0C879 139 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 FAUP35544 74 aaKnown RBP7.52□□□□□ -1.21
CD48-202ENST00000368046 ZNF79Q15937 498 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 SPANXN2Q5MJ10 180 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 CLEC19AQ6UXS0 136 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 IL34Q6ZMJ4 242 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 GPHB5Q86YW7 130 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 SGPP2Q8IWX5 399 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 RRNAD1Q96FB5 475 aaKnown RBP7.52□□□□□ -1.21
CD48-202ENST00000368046 NAA60Q9H7X0 242 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 MCUBQ9NWR8 336 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 PEMTQ9UBM1 199 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 F11RQ9Y624 299 aaKnown RBP7.52□□□□□ -1.21
CD48-202ENST00000368046 TNCP24821 2201 aa7.52□□□□□ -1.21
CD48-202ENST00000368046 MFSD2BA6NFX1 497 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 CRYM-AS1A6NIL9 109 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 PPP5D1E7EU14 171 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 LGALS9O00182 355 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 IGHV3-23P01764 117 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 CSN3P07498 182 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 OR5AC1P0C628 307 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 SPNP16150 400 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 ARL3P36405 182 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 MECP2P51608 486 aaKnown RBP7.51□□□□□ -1.21
CD48-202ENST00000368046 AKR1C2P52895 323 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 ERHP84090 104 aaKnown RBP7.51□□□□□ -1.21
CD48-202ENST00000368046 PRCDQ00LT1 54 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
CD48-202ENST00000368046 FAM106AQ4KMX7 169 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 FAM219AQ8IW50 185 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 OR1P1Q8NH06 330 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 CCDC140Q96MF4 163 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 PRR25Q96S07 402 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 ATP6V0BQ99437 205 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 S4R3C0 116 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
CD48-202ENST00000368046 INS-IGF2F8WCM5 200 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 PAX4O43316 350 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 LY86O95711 162 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 IFNA17P01571 189 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 HLA-AP01891 365 aaKnown RBP7.5□□□□□ -1.21
CD48-202ENST00000368046 GP9P14770 177 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 MFAP2P55001 183 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 IZUMO4Q1ZYL8 232 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 PLET1Q6UQ28 207 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 SELENOHQ8IZQ5 122 aaKnown RBP7.5□□□□□ -1.21
CD48-202ENST00000368046 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 SCARB1Q8WTV0 552 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 RBPMSQ93062 196 aaKnown RBP7.5□□□□□ -1.21
CD48-202ENST00000368046 TRIM63Q969Q1 353 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 GALNT14Q96FL9 552 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 SLC25A21Q9BQT8 299 aaPredicted RBP7.5□□□□□ -1.21
CD48-202ENST00000368046 PDCD10Q9BUL8 212 aa7.5□□□□□ -1.21
CD48-202ENST00000368046 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.5□□□□□ -1.21
CD48-202ENST00000368046 A0A0G2JRQ6 117 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 ST8SIA3O43173 380 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 AKR1C4P17516 323 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 SNCAP37840 140 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 TMEM187Q14656 261 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 Q6ZRM9 215 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 ZNF114Q8NC26 417 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 RNASE11Q8TAA1 199 aaKnown RBP7.49□□□□□ -1.21
CD48-202ENST00000368046 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 IL22RA2Q969J5 263 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 TMEM230Q96A57 120 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 GPR146Q96CH1 333 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
CD48-202ENST00000368046 SRRQ9GZT4 340 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms