RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 UMAD1C9J7I0 102 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 PHOX2AO14813 284 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 FOXH1O75593 365 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 SCGB1D2O95969 90 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 KRASP01116 189 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 ARF6P62330 175 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 Q6ZRM9 215 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 SNHG12Q9BXW3 62 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
USF1-203ENST00000368021 CACNG5Q9UF02 275 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 ZFP30Q9Y2G7 519 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 IGHV2-70DA0A0C4DH43 119 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 E5RGE8 158 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 G6PCP35575 357 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 RTL8BQ17RB0 113 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
USF1-203ENST00000368021 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 OR11H6Q8NGC7 330 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 OR5AN1Q8NGI8 311 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 TMED6Q8WW62 240 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 PRO1933Q9H354 126 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 RCL1Q9Y2P8 373 aaKnown RBP9.79□□□□□ -0.84
USF1-203ENST00000368021 NSG2Q9Y328 171 aa9.79□□□□□ -0.84
USF1-203ENST00000368021 AMMECR1Q9Y4X0 333 aaPredicted RBP9.79□□□□□ -0.84
USF1-203ENST00000368021 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
USF1-203ENST00000368021 BUB1B-PAK6H3BSN5 160 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 MMP9P14780 707 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 FABP4P15090 132 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 SNCAP37840 140 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 SRSF3P84103 164 aaKnown RBP9.78□□□□□ -0.84
USF1-203ENST00000368021 POU2AF1Q16633 256 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 GUK1Q16774 197 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 CXorf66Q5JRM2 361 aaPredicted RBP9.78□□□□□ -0.84
USF1-203ENST00000368021 C1orf194Q5T5A4 169 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 Q71RC1 249 aaPredicted RBP9.78□□□□□ -0.84
USF1-203ENST00000368021 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 FOXRED2Q8IWF2 684 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
USF1-203ENST00000368021 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 CYTL1Q9NRR1 136 aa9.78□□□□□ -0.84
USF1-203ENST00000368021 IGHV4-61A0A0C4DH41 118 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 KIR2DL5BA0A0G2JN68 375 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 KIR2DL5BA0A0G2JPC4 375 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 H0YJW9 148 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 APOA2P02652 100 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 GZMBP10144 247 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 ERVK-16P61578 105 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 RBX1P62877 108 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 LCN2P80188 198 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 PNRC1Q12796 327 aaPredicted RBP9.77□□□□□ -0.84
USF1-203ENST00000368021 IZUMO4Q1ZYL8 232 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 MIDNQ504T8 468 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 THNSL2Q86YJ6 484 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 KIR2DL5AQ8N109 375 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 TMEM18Q96B42 140 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 NABP2Q9BQ15 211 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 C11orf1Q9H5F2 150 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 TMEM231Q9H6L2 316 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.77□□□□□ -0.84
USF1-203ENST00000368021 SLC35D1Q9NTN3 355 aa9.77□□□□□ -0.84
USF1-203ENST00000368021 C20orf202A1L168 122 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 PRSS47A8MTI9 375 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 HRASP01112 189 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 SEC11BP0C7V7 166 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 SLC25A16P16260 332 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 COX7A1P24310 79 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 P2RY1P47900 373 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 PET117Q6UWS5 81 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 PDPNQ86YL7 162 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 PNKDQ8N490 385 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 OSR1Q8TAX0 266 aaPredicted RBP9.77□□□□□ -0.85
USF1-203ENST00000368021 HIST1H2BLQ99880 126 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
USF1-203ENST00000368021 ABCA2Q9BZC7 2435 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 ODF3BA8MYP8 253 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 LY6LH3BQJ8 138 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 EREGO14944 169 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 MC5RP33032 325 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 DLX1P56177 255 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 SOHLH1Q5JUK2 328 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 GPR157Q5UAW9 335 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 HCP5Q6MZN7 132 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 SLC25A24Q6NUK1 477 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 SLC35E3Q7Z769 313 aa9.76□□□□□ -0.85
USF1-203ENST00000368021 ORAOV1Q8WV07 137 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms