RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 F8W036 122 aa12□□□□□ -0.49
NEK2-201ENST00000366998 SCO1O75880 301 aa12□□□□□ -0.49
NEK2-201ENST00000366998 MBP02144 154 aa12□□□□□ -0.49
NEK2-201ENST00000366998 REG1AP05451 166 aa12□□□□□ -0.49
NEK2-201ENST00000366998 CD5P06127 495 aa12□□□□□ -0.49
NEK2-201ENST00000366998 SNRNP70P08621 437 aaKnown RBP12□□□□□ -0.49
NEK2-201ENST00000366998 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
NEK2-201ENST00000366998 HABP2Q14520 560 aaPredicted RBP12□□□□□ -0.49
NEK2-201ENST00000366998 PEA15Q15121 130 aa12□□□□□ -0.49
NEK2-201ENST00000366998 ZNF726P1Q15940 193 aa12□□□□□ -0.49
NEK2-201ENST00000366998 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
NEK2-201ENST00000366998 MGST2Q99735 147 aa12□□□□□ -0.49
NEK2-201ENST00000366998 NBR2O15453 112 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
NEK2-201ENST00000366998 DSCR9P59020 149 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 DEFA5Q01523 94 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 SSX7Q7RTT5 188 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 OR10G4Q8NGN3 311 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 OR10G9Q8NGN4 311 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 OR10G7Q8NGN6 311 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 OR2T10Q8NGZ9 312 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 EAF1Q96JC9 268 aaPredicted RBP11.99□□□□□ -0.49
NEK2-201ENST00000366998 SLC25A22Q9H936 323 aa11.99□□□□□ -0.49
NEK2-201ENST00000366998 SFTA3P0C7M3 94 aa11.98□□□□□ -0.49
NEK2-201ENST00000366998 APELAP0DMC3 54 aa11.98□□□□□ -0.49
NEK2-201ENST00000366998 FGF8P55075 233 aaPredicted RBP11.98□□□□□ -0.49
NEK2-201ENST00000366998 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
NEK2-201ENST00000366998 FAM122CQ6P4D5 195 aa11.98□□□□□ -0.49
NEK2-201ENST00000366998 RPP25LQ8N5L8 163 aaKnown RBP11.98□□□□□ -0.49
NEK2-201ENST00000366998 GGTLC1Q9BX51 225 aa11.98□□□□□ -0.49
NEK2-201ENST00000366998 SLC39A9Q9NUM3 307 aa11.98□□□□□ -0.49
NEK2-201ENST00000366998 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
NEK2-201ENST00000366998 IGLC7A0M8Q6 106 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 C9JQL5 133 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 FNDC10F2Z333 226 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 FCN1O00602 326 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEK2-201ENST00000366998 PAX1P15863 534 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 ADCYAP1P18509 176 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 M6PRP20645 277 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 SAA4P35542 130 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 PPT1P50897 306 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 RAB31Q13636 194 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 HAGHQ16775 308 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 CLEC12BQ2HXU8 276 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 MBD3L1Q8WWY6 194 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 P2RX4Q99571 388 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 TRAV1-1A0A0B4J248 108 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 RBFOX3A6NFN3 312 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 CNIH1O95406 144 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 OPRK1P41145 380 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 PAX8Q06710 450 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 CD69Q07108 199 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 FBLN7Q53RD9 439 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
NEK2-201ENST00000366998 MALSU1Q96EH3 234 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 SCRT1Q9BWW7 348 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
NEK2-201ENST00000366998 KCNIP2Q9NS61 270 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
NEK2-201ENST00000366998 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
NEK2-201ENST00000366998 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 NPFFO15130 113 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 HMGB3O15347 200 aaKnown RBP11.96□□□□□ -0.49
NEK2-201ENST00000366998 AREGP15514 252 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 MLANAQ16655 118 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 NPBQ8NG41 125 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 SLC35E1Q96K37 410 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 RARRES2Q99969 163 aa11.96□□□□□ -0.49
NEK2-201ENST00000366998 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.49
NEK2-201ENST00000366998 CHD6Q8TD26 2715 aa11.96□□□□□ -0.5
NEK2-201ENST00000366998 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 CYB5BO43169 146 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 SOX15O60248 233 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 NDUFA3O95167 84 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 TMEM11P17152 192 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 GAMTQ14353 236 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 TMEM144Q7Z5S9 345 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 RNASEH2CQ8TDP1 164 aaKnown RBP11.95□□□□□ -0.5
NEK2-201ENST00000366998 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 NCBP2LA6PVI3 153 aaKnown RBP11.95□□□□□ -0.5
NEK2-201ENST00000366998 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 DEFA4P12838 97 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 SLC25A16P16260 332 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 GPX4P36969 197 aaPredicted RBP11.95□□□□□ -0.5
NEK2-201ENST00000366998 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
NEK2-201ENST00000366998 KRTAP10-9P60411 292 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
NEK2-201ENST00000366998 C5orf64Q2M2E5 130 aa11.95□□□□□ -0.5
NEK2-201ENST00000366998 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms