RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 NT5MQ9NPB1 228 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 NUDT15Q9NV35 164 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 RAB22AQ9UL26 194 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 TRAPPC2LQ9UL33 140 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 COPS3Q9UNS2 423 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 NUBP2Q9Y5Y2 271 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 NPHP4O75161 1426 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 CEP152O94986 1710 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 WDR19Q8NEZ3 1342 aa-2.2□□□□□ -2.76
RNU6-228P-201ENST00000362700 PLIN4Q96Q06 1357 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TRAV12-2A0A075B6T6 113 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TRBV7-1A0A0A6YYK4 115 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TRAV38-1A0A0B4J264 116 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PNMA8CA0A1B0GUJ8 204 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 LOC101927531A0A1B0GV80 90 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PQLC2LA1A4F0 135 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 C9JCJ5 164 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 H0YCG3 227 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 CDC42EP2O14613 210 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 HLA-AP01891 365 aaKnown RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 MT-ND4P03905 459 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 HSPD1P10809 573 aaKnown RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 GALP22466 123 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PRKACBP22694 351 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 GPX4P36969 197 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 CRATP43155 626 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SSR2P43308 183 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 UBE2NP61088 152 aaKnown RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 NCBP1Q09161 790 aaKnown RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 GNA13Q14344 377 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 STXBP2Q15833 593 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 MPPE1Q53F39 396 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 DEFB121Q5J5C9 76 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PPM1LQ5SGD2 360 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 FAM180BQ6P0A1 224 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 FAHD2BQ6P2I3 314 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SFXN4Q6P4A7 337 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 ARL9Q6T311 187 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PPP1R21Q6ZMI0 780 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SUPT6HQ7KZ85 1726 aaKnown RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PLCZ1Q86YW0 608 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 UBE2J2Q8N2K1 259 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TMCO5AQ8N6Q1 288 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TCTEX1D1Q8N7M0 179 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 OR8J1Q8NGP2 316 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 OR1L8Q8NGR8 309 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 OR10R2Q8NGX6 335 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 OR1L1Q8NH94 360 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PIGXQ8TBF5 258 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SLC37A2Q8TED4 501 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 TEKT4Q8WW24 435 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 VSTM2LQ96N03 204 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SH3GL1Q99961 368 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 GABARAPL3Q9BY60 117 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 NMNAT1Q9HAN9 279 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PARVGQ9HBI0 331 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 NDUFA4L2Q9NRX3 87 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 CLN6Q9NWW5 311 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 RAB20Q9NX57 234 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 BET1LQ9NYM9 111 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 CAMSAP1Q5T5Y3 1602 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 UHRF1BP1LA0JNW5 1464 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 KIF16BQ96L93 1317 aa-2.21□□□□□ -2.76
RNU6-228P-201ENST00000362700 PIK3C2AO00443 1686 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 IBTKQ9P2D0 1353 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 CHD1O14646 1710 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 CLIP1P30622 1438 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 NUP160Q12769 1436 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 A0A0G2JMP0 313 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 A0A0X1KG70 313 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 TINCRA0A1B0GVN0 87 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 SH2D1BO14796 132 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 AZIN1O14977 448 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 AGPAT2O15120 278 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 UBL3O95164 117 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 PTBP3O95758 552 aaKnown RBP-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 AGR2O95994 175 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 CXorf1O96002 111 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 PDYNP01213 254 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 SPP1P10451 314 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 MIFP14174 115 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 TNNI1P19237 187 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 HIST1H1TP22492 207 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 CD24P25063 80 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 PBLDP30039 288 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 PHBP35232 272 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 KRT20P35900 424 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 ARL2P36404 184 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 ARL3P36405 182 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 HSPA9P38646 679 aaKnown RBP-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 ACADSBP45954 432 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 XCL1P47992 114 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 CCT5P48643 541 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 GMFBP60983 142 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 H3F3AP84243 136 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 ATP5G2Q06055 141 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 RPA4Q13156 261 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 AKIRIN2Q53H80 203 aa-2.22□□□□□ -2.76
RNU6-228P-201ENST00000362700 HSP90AA4PQ58FG1 418 aa-2.22□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms