RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 FAM90A9PA6NNJ1 464 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 H7C2G1 150 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
SMC5-201ENST00000361138 CCL8P80075 99 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 CDCP2Q5VXM1 449 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 AKIRIN1Q9H9L7 192 aaPredicted RBP11.68□□□□□ -0.54
SMC5-201ENST00000361138 A0A0G2JMM0 328 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 A0A1W2PPB8 328 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 KIR3DP1A8MWS1 328 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 EFNA2O43921 213 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 VWCEQ96DN2 955 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 C15orf61A6NNL5 157 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 C9JCJ5 164 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 GNG5P63218 68 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 MBNL2Q5VZF2 373 aaKnown RBP11.68□□□□□ -0.54
SMC5-201ENST00000361138 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
SMC5-201ENST00000361138 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 VOPP1Q96AW1 172 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
SMC5-201ENST00000361138 M0QZ24 198 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 CSRP2Q16527 193 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 OR52E5Q8NH55 327 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 MYO7AQ13402 2215 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 TMEM14EPQ6UXP3 125 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 OR4X2Q8NGF9 303 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 ZNF581Q9P0T4 197 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 PATE3B3GLJ2 98 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 SIGLEC12Q96PQ1 595 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 DOCK3Q8IZD9 2030 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 TRAV30A0A087WSZ9 112 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 CACNG8Q8WXS5 425 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 NEUROG1Q92886 237 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 DCTN5Q9BTE1 182 aa11.67□□□□□ -0.54
SMC5-201ENST00000361138 ATP5L2Q7Z4Y8 100 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 TMUB1Q9BVT8 246 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 Q9H3A6 140 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 TRAV8-6A0A0B4J262 113 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 CX3CL1P78423 397 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 GPR82Q96P67 336 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 CD3EP07766 207 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 RAB1CQ92928 201 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 RAB1BQ9H0U4 201 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
SMC5-201ENST00000361138 C1RLQ9NZP8 487 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 A0A1B0GWB2 263 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 SEC11AP67812 179 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 OSR1Q8TAX0 266 aaPredicted RBP11.66□□□□□ -0.54
SMC5-201ENST00000361138 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 PRR33A8MZF0 331 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 C3orf79P0CE67 100 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 PLAURQ03405 335 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 TTC9CQ8N5M4 171 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 FGFBP3Q8TAT2 258 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
SMC5-201ENST00000361138 SDK1Q7Z5N4 2213 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 Q6AWC8 147 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 NUDT11Q96G61 164 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 CRIM1Q9NZV1 1036 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 IGLV3-12A0A075B6K2 115 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 NLRC5Q86WI3 1866 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 GPX1P07203 203 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 SPATA31B1PQ5VZV4 182 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 GGTLC1Q9BX51 225 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
SMC5-201ENST00000361138 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 FOXH1O75593 365 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 TSPOP30536 169 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 ECSCRQ19T08 205 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 MGST2Q99735 147 aa11.65□□□□□ -0.54
SMC5-201ENST00000361138 TRBV20OR9-2A0A075B6H5 130 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
SMC5-201ENST00000361138 CELA3AP09093 270 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 CDKN1AP38936 164 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 MFAP4P55083 255 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 BMPERQ8N8U9 685 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
SMC5-201ENST00000361138 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 FOXC2Q99958 501 aa11.64□□□□□ -0.55
SMC5-201ENST00000361138 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms