RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 INS-IGF2F8WCM5 200 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 IFNA5P01569 189 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 CD24P25063 80 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 ERHP84090 104 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 PJVKQ0ZLH3 352 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 ATP6V1FQ16864 119 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 MRGPRG-AS1Q2M3A8 158 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 OR8G2PQ6IF36 304 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 ARV1Q9H2C2 271 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 FAM96BQ9Y3D0 163 aa11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 SONP18583 2426 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-203ENST00000359265 ABCA1O95477 2261 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 A0A0U1RQK1 487 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 PMS2P5A8MQ11 134 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 CD5LO43866 347 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 AVPP01185 164 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 FBP1P09467 338 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 HTR2BP41595 481 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 COMPP49747 757 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 RAB14P61106 215 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 GNB1P62873 340 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 ARL16Q0P5N6 197 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 KLF17Q5JT82 389 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 NANPQ8TBE9 248 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
PDLIM5-203ENST00000359265 CA2P00918 260 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 IFNA4P05014 189 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 SNCAP37840 140 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 LRRC75BQ2VPJ9 315 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 C2orf83Q53S99 150 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 HSD17B13Q7Z5P4 300 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 OR10W1Q8NGF6 305 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 SCGB1C1Q8TD33 95 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
PDLIM5-203ENST00000359265 UBE2L5PA0A1B0GUS4 154 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 CNIH1O95406 144 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 RNASE2P10153 161 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 DLK1P80370 383 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 FBLN7Q53RD9 439 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 HSD17B11Q8NBQ5 300 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 TMED6Q8WW62 240 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 SRSF12Q8WXF0 261 aaKnown RBP11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 UQCC1Q9NVA1 299 aa11.02□□□□□ -0.65
PDLIM5-203ENST00000359265 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 E7EUB6 86 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 FBXO24O75426 580 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 HNF1AP20823 631 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 AANATQ16613 207 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 VWC2Q2TAL6 325 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 BSXQ3C1V8 233 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 FAM74A1Q5RGS3 127 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 GNPNAT1Q96EK6 184 aaPredicted RBP11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 SSX3Q99909 188 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 GGACTQ9BVM4 153 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 SLC25A32Q9H2D1 315 aa11.01□□□□□ -0.65
PDLIM5-203ENST00000359265 A0A1B0GW64 132 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 RPS10-NUDT3A0A1W2PQS6 291 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 PRSS46E5RG02 174 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 FCN1O00602 326 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 FSHBP01225 129 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 OR13C7P0DN81 318 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 SPP1P10451 314 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 ATP6V0CP27449 155 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 SSBP2P81877 361 aaPredicted RBP11□□□□□ -0.65
PDLIM5-203ENST00000359265 WT1-ASQ06250 92 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 FXYD3Q14802 87 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 Q8N9W7 124 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 ZNF114Q8NC26 417 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 RASL11BQ9BPW5 248 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 SLC25A33Q9BSK2 321 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 MOB4Q9Y3A3 225 aa11□□□□□ -0.65
PDLIM5-203ENST00000359265 TEX22C9J3V5 150 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 FNDC10F2Z333 226 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 HLA-DRB1P01911 266 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 TUSC1Q2TAM9 212 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 C9orf139Q6ZV77 190 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 RNF141Q8WVD5 230 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 ARPC1AQ92747 370 aa10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 RBM14Q96PK6 669 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-203ENST00000359265 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms