RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 UPK2O00526 184 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 NDUFA2O43678 99 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 PAX6P26367 422 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 IER3P46695 156 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 ADIPOQQ15848 244 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 ZNF295-AS1Q8N0V1 137 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 OR5AU1Q8NGC0 362 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 NEUROG1Q92886 237 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 MGST2Q99735 147 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 SRD5A3Q9H8P0 318 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 RANP62826 216 aaKnown RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 ZNF788Q6ZQV5 615 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 OR9G1Q8NH87 305 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 SEPSECSQ9HD40 501 aaKnown RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 SLC17A3O00476 420 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 USF1P22415 310 aaPredicted RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 MLANAQ16655 118 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 C10orf113Q5VZT2 155 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
SSU72-202ENST00000359060 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 PQLC2Q6ZP29 291 aa9.2□□□□□ -0.94
SSU72-202ENST00000359060 NTF3P20783 257 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 FXYD3Q14802 87 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 EFNB3Q15768 340 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 RNASE6Q93091 150 aaKnown RBP9.19□□□□□ -0.94
SSU72-202ENST00000359060 SGK494Q96LW2 274 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 ZNF355PQ9NSJ1 428 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.19□□□□□ -0.94
SSU72-202ENST00000359060 RPL27AP46776 148 aaKnown RBP9.19□□□□□ -0.94
SSU72-202ENST00000359060 LYZP61626 148 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 C17orf58Q2M2W7 97 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 MUC15Q8N387 334 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 OR2T6Q8NHC8 308 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 OSR1Q8TAX0 266 aaPredicted RBP9.19□□□□□ -0.94
SSU72-202ENST00000359060 SPTBN4Q9H254 2564 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 NCBP2LA6PVI3 153 aaKnown RBP9.19□□□□□ -0.94
SSU72-202ENST00000359060 DLL1O00548 723 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 SFRP2Q96HF1 295 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 SCRT1Q9BWW7 348 aa9.19□□□□□ -0.94
SSU72-202ENST00000359060 HCFC1P51610 2035 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 H3BTX0 84 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 LOXL3P58215 753 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR1P1Q8NH06 330 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR52E5Q8NH55 327 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR51M1Q9H341 326 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 CREBBPQ92793 2442 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 SNURFLB1AK76 121 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 VENTXO95231 258 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 MOSP00540 346 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 MMDQ15546 238 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 LYPD2Q6UXB3 125 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 IGLV3-9A0A075B6K5 115 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 CRISP2P16562 243 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 CEACAM8P31997 349 aaPredicted RBP9.18□□□□□ -0.94
SSU72-202ENST00000359060 SRP14P37108 136 aaKnown RBP9.18□□□□□ -0.94
SSU72-202ENST00000359060 MEF2CQ06413 473 aaPredicted RBP9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR5I1Q13606 314 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 BATFQ16520 125 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 OR8I2Q8N0Y5 310 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 MS4A10Q96PG2 267 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 PAXXQ9BUH6 204 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 DNAJC4Q9NNZ3 241 aa9.18□□□□□ -0.94
SSU72-202ENST00000359060 TEX50A0A1B0GTY4 177 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 APOBEC3AP31941 199 aaPredicted RBP9.17□□□□□ -0.94
SSU72-202ENST00000359060 MC5RP33032 325 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 CFHR2P36980 270 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 ARF6P62330 175 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 GUSBP1Q15486 140 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 OR8B3Q8NGG8 313 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 OR1L6Q8NGR2 347 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 RAB1CQ92928 201 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 OR8B2Q96RD0 313 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 RAB1BQ9H0U4 201 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 CACNA1AO00555 2505 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 FOXH1O75593 365 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 DLX1P56177 255 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 PRCDQ00LT1 54 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 TMEM144Q7Z5S9 345 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 RALYQ9UKM9 306 aaKnown RBP9.17□□□□□ -0.94
SSU72-202ENST00000359060 PPIAL4CA0A0B4J2A2 164 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 PPIAL4GP0DN37 164 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 BRWD1-AS2P59051 145 aa9.17□□□□□ -0.94
SSU72-202ENST00000359060 TCF15Q12870 199 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms