RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CRYGCP07315 174 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 ELANEP08246 267 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 PSMB8P28062 276 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 H2BFSP57053 126 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 FCN2Q15485 313 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 C19orf35Q6ZS72 473 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 OR2C3Q8N628 320 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 MS4A10Q96PG2 267 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 INS-IGF2F8WCM5 200 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 H3BUA1 57 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 SSSCA1O60232 199 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 TRGV3P03979 118 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 IAPPP10997 89 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 TPPP2P59282 170 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 S100A10P60903 97 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
TPM1-206ENST00000358278 ID3Q02535 119 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
TPM1-206ENST00000358278 F11RQ9Y624 299 aaKnown RBP11.91□□□□□ -0.5
TPM1-206ENST00000358278 WNK1Q9H4A3 2382 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
TPM1-206ENST00000358278 CD28P10747 220 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 CXCL3P19876 107 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 POLR2GP62487 172 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM1-206ENST00000358278 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 OR11H7Q8NGC8 314 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
TPM1-206ENST00000358278 NMES1Q9C002 83 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
TPM1-206ENST00000358278 LSM5Q9Y4Y9 91 aaKnown RBP11.9□□□□□ -0.5
TPM1-206ENST00000358278 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 RPLP1P05386 114 aaKnown RBP11.89□□□□□ -0.51
TPM1-206ENST00000358278 HTR2BP41595 481 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 RAB9AP51151 201 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 SUB1P53999 127 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM1-206ENST00000358278 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
TPM1-206ENST00000358278 Q6ZNX1 250 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 SLC24A4Q8NFF2 622 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 OR1P1Q8NH06 330 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 P2RX4Q99571 388 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 MDFIQ99750 246 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 TCRBV4S1A1TA0A5B7 111 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 IFNA10P01566 189 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
TPM1-206ENST00000358278 KRTAP10-3P60369 221 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 RHOGP84095 191 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 DEFA5Q01523 94 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 LRRC37A5PQ49AS3 106 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 SLC25A24Q6NUK1 477 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
TPM1-206ENST00000358278 CITED2Q99967 270 aaPredicted RBP11.89□□□□□ -0.51
TPM1-206ENST00000358278 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
TPM1-206ENST00000358278 K7EPK0 472 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 OR2J3O76001 311 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 LY86O95711 162 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
TPM1-206ENST00000358278 NPY1RP25929 384 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 RAB32Q13637 225 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 HIST2H2BDQ6DRA6 164 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 ZFP57Q9NU63 452 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 THYN1Q9P016 225 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 U3KQ87 197 aa11.88□□□□□ -0.51
TPM1-206ENST00000358278 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 FAM223BA6NKX1 122 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 BRI3O95415 125 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 CD83Q01151 205 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 IL15RAQ13261 267 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 FAM223AQ8IWN6 122 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 NECAP1Q8NC96 275 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 MISP3Q96FF7 219 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
TPM1-206ENST00000358278 FBXL7Q9UJT9 491 aa11.87□□□□□ -0.51
TPM1-206ENST00000358278 PAIP2BQ9ULR5 123 aaKnown RBP11.87□□□□□ -0.51
TPM1-206ENST00000358278 TSSC4Q9Y5U2 329 aaPredicted RBP11.87□□□□□ -0.51
TPM1-206ENST00000358278 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 A0A0G2JLM5 398 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 H3BP45 60 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 L7N2F9 121 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
TPM1-206ENST00000358278 MFAP2P55001 183 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 VAMP2P63027 116 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
TPM1-206ENST00000358278 C15orf32Q32M92 178 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 BSXQ3C1V8 233 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 CITED1Q99966 193 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 ZNF747Q9BV97 191 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 DMRT1Q9Y5R6 373 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 A0A1W2PRX2 142 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
TPM1-206ENST00000358278 KRTAP21-3Q3LHN1 58 aa11.86□□□□□ -0.51
TPM1-206ENST00000358278 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1136.8 ms