RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 IFNA4P05014 189 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 NMBP08949 121 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 SEC11BP0C7V7 166 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 OR13C7P0DN81 318 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 ATP6V0CP27449 155 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 SNCAP37840 140 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 TUSC1Q2TAM9 212 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 PCNPQ8WW12 178 aaKnown RBP13.55□□□□□ -0.24
TPM1-205ENST00000357980 UQCC1Q9NVA1 299 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 UBE2L5PA0A1B0GUS4 154 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 IFNA5P01569 189 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 AREGP15514 252 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 SSX3Q99909 188 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 SLC25A32Q9H2D1 315 aa13.55□□□□□ -0.24
TPM1-205ENST00000357980 FAM157CP0CG43 387 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 MDKP21741 143 aaPredicted RBP13.54□□□□□ -0.24
TPM1-205ENST00000357980 RUNX1Q01196 453 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 ZNF562Q6V9R5 426 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 MRPL41Q8IXM3 137 aaKnown RBP13.54□□□□□ -0.24
TPM1-205ENST00000357980 ZNF114Q8NC26 417 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 NANPQ8TBE9 248 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 P2RX4Q99571 388 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 SRSF8Q9BRL6 282 aaKnown RBP13.54□□□□□ -0.24
TPM1-205ENST00000357980 WDR61Q9GZS3 305 aaKnown RBP13.54□□□□□ -0.24
TPM1-205ENST00000357980 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
TPM1-205ENST00000357980 CNIH1O95406 144 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 RAB14P61106 215 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 DLK1P80370 383 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 FXYD3Q14802 87 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 AANATQ16613 207 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 PVRIGQ6DKI7 326 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
TPM1-205ENST00000357980 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
TPM1-205ENST00000357980 MXRA5Q9NR99 2828 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 SMAD7O15105 426 aaKnown RBP13.53□□□□□ -0.24
TPM1-205ENST00000357980 FGF16O43320 207 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 HLA-DRB1P01911 266 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 REG1AP05451 166 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 CX3CL1P78423 397 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 NDPQ00604 133 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 BCL6BQ8N143 479 aaPredicted RBP13.53□□□□□ -0.24
TPM1-205ENST00000357980 SSMEM1Q8WWF3 244 aa13.53□□□□□ -0.24
TPM1-205ENST00000357980 TAF15Q92804 592 aaKnown RBP eCLIP13.53□□□□□ -0.24
TPM1-205ENST00000357980 GNPNAT1Q96EK6 184 aaPredicted RBP13.53□□□□□ -0.24
TPM1-205ENST00000357980 APELAP0DMC3 54 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 SULT1A2P50226 295 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 NDUFA5Q16718 116 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 ARSJQ5FYB0 599 aaPredicted RBP13.52□□□□□ -0.25
TPM1-205ENST00000357980 SLC25A24Q6NUK1 477 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 TMEM219Q86XT9 240 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 C5orf56Q8N8D9 126 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 SCGB1C1Q8TD33 95 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 SLC25A33Q9BSK2 321 aa13.52□□□□□ -0.25
TPM1-205ENST00000357980 MYO9AB2RTY4 2548 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 TLN2Q9Y4G6 2542 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 IGHV7-81A0A0B4J1V7 117 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 MDFIC2A0A1B0GVS7 189 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 SUB1P53999 127 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPM1-205ENST00000357980 KRTAP1-1Q07627 177 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 RNF141Q8WVD5 230 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 ARPC1AQ92747 370 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 RSG1Q9BU20 258 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
TPM1-205ENST00000357980 FNDC10F2Z333 226 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 H3BUX3 64 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 MFAP2P55001 183 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 DEFB112Q30KQ8 113 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 SLC7A5P1Q8MH63 180 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
TPM1-205ENST00000357980 RASL11BQ9BPW5 248 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 WDR83OSQ9Y284 106 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 A6NDX4 124 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 AMY1AP04745 511 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 TREML4Q6UXN2 200 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 CENPVQ7Z7K6 275 aaPredicted RBP13.5□□□□□ -0.25
TPM1-205ENST00000357980 OR2G3Q8NGZ4 309 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 OR1P1Q8NH06 330 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 LRRC20Q8TCA0 184 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
TPM1-205ENST00000357980 FAM103A1Q9BTL3 118 aaKnown RBP13.5□□□□□ -0.25
TPM1-205ENST00000357980 FBXO7Q9Y3I1 522 aa13.5□□□□□ -0.25
TPM1-205ENST00000357980 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
TPM1-205ENST00000357980 LINC00862A6NCI5 91 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
TPM1-205ENST00000357980 FGF7P21781 194 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 CD69Q07108 199 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 C22orf15Q8WYQ4 148 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 LSM4Q9Y4Z0 139 aaKnown RBP13.49□□□□□ -0.25
TPM1-205ENST00000357980 DMRT1Q9Y5R6 373 aa13.49□□□□□ -0.25
TPM1-205ENST00000357980 CTRB1P17538 263 aa13.48□□□□□ -0.25
TPM1-205ENST00000357980 CTRB2Q6GPI1 263 aa13.48□□□□□ -0.25
TPM1-205ENST00000357980 BTNL8Q6UX41 500 aa13.48□□□□□ -0.25
TPM1-205ENST00000357980 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms