RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 A0A1W2PS18 150 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 AMY1AP04745 511 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 RPL15P61313 204 aaKnown RBP8.35□□□□□ -1.07
RNF40-202ENST00000357890 BLNKQ8WV28 456 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
RNF40-202ENST00000357890 PEF1Q9UBV8 284 aaKnown RBP8.35□□□□□ -1.07
RNF40-202ENST00000357890 C21orf140B9A014 251 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 ACP1P24666 158 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 NPY1RP25929 384 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 SRSF7Q16629 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
RNF40-202ENST00000357890 COLCA1Q6ZS62 124 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 SLC25A40Q8TBP6 338 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 POM121L2Q96KW2 1035 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 SAP30LQ9HAJ7 183 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 PRR14LQ5THK1 2151 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 IGHV1-69-2A0A0G2JMI3 117 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 ZNF207O43670 478 aaKnown RBP8.34□□□□□ -1.07
RNF40-202ENST00000357890 GCHFRP30047 84 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 ZNF83P51522 516 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 CLDN18P56856 261 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
RNF40-202ENST00000357890 ALKBH6Q3KRA9 238 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 PCSK4Q6UW60 755 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 Q6ZPA2 131 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 Q6ZS49 121 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 TMEM105Q8N8V8 129 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 TMEM178AQ8NBL3 297 aa8.34□□□□□ -1.07
RNF40-202ENST00000357890 F11RQ9Y624 299 aaKnown RBP8.34□□□□□ -1.07
RNF40-202ENST00000357890 TRGV5A0A0B4J1U4 118 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 SAP30O75446 220 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 NDUFB8O95169 186 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 LINC00869P0C866 280 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 SP9P0CG40 484 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 TNXAQ16473 311 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 DHRS13Q6UX07 377 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 TMEM116Q8NCL8 245 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 PKIBQ9C010 78 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.08
RNF40-202ENST00000357890 C7orf71A4D174 169 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
RNF40-202ENST00000357890 LRRC30A6NM36 301 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 HBZP02008 142 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
RNF40-202ENST00000357890 TIMM9Q9Y5J7 89 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 SP1P08047 785 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 NPPCP23582 126 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 NMUP48645 174 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 LINC00205P59089 165 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 TAS2R45P59539 299 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 PPP1R35Q8TAP8 253 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 TAAR6Q96RI8 345 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 J3QR89 54 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 WNT9BO14905 357 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 TNFSF15O95150 251 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 CLDN14O95500 239 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 PLAUP00749 431 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 IGLL1P15814 213 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 KRTAP27-1Q3LI81 207 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 RBMXL3Q8N7X1 1067 aaKnown RBP8.33□□□□□ -1.08
RNF40-202ENST00000357890 PRSS3P2Q8NHM4 247 aa8.33□□□□□ -1.08
RNF40-202ENST00000357890 TFF1P04155 84 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 GATA2P23769 480 aaPredicted RBP8.32□□□□□ -1.08
RNF40-202ENST00000357890 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 FA2HQ7L5A8 372 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 EAF1Q96JC9 268 aaPredicted RBP8.32□□□□□ -1.08
RNF40-202ENST00000357890 SH3BGRL2Q9UJC5 107 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 COL6A3P12111 3177 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 C17orf98A8MV24 154 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 AGFG2O95081 481 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 OR1N2Q8NGR9 330 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 EXPH5Q8NEV8 1989 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 A6NDN8 102 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 SSTR5P35346 364 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 PSG9Q00887 426 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 S1PR3Q99500 378 aa8.32□□□□□ -1.08
RNF40-202ENST00000357890 ZNF503-AS2A6NEH8 195 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 OOEPA6NGQ2 149 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 CELA3BP08861 270 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 SELENOVP59797 346 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 COX19Q49B96 90 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 ZNF645Q8N7E2 425 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 DEFB108BQ8NET1 73 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 CACNA1HO95180 2353 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 IGHV2-70DA0A0C4DH43 119 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 C12orf77C9JDV5 145 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 ARF6P62330 175 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 SMIM21Q3B7S5 101 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 TEPPQ6URK8 271 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 MS4A5Q9H3V2 200 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 WNK2Q9Y3S1 2297 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 TRBV9A0A0B4J1U6 114 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 IGKV1-39P01597 117 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 IGKV1D-39P04432 117 aa8.31□□□□□ -1.08
RNF40-202ENST00000357890 PRB4P10163 310 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms